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Nucleic atom dist Protein atom
DG10:C.OP2/1 3.28 ARG421:A.NH1/1
DC11:C.OP1/1 2.7 SER424:A.N/1
DC11:C.OP2/1 2.83 LYS431:A.NZ/1
DC11:D.OP2/1 3.45 ARG502:A.NH1/1
DG12:D.OP1/1 2.84 ARG505:A.NH1/1
DG12:D.OP2/1 2.69 ARG505:A.NH2/1
DC13:D.OP1/1 3.38 LYS161:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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