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Nucleic atom dist Protein atom
DG2:C.O6/1 3.03 ARG187:L.NH1/1
DC3:C.OP1/1 3.3 LYS269:L.NZ/1
DT5:C.O2/1 2.49 ARG238:K.NH2/1
DA6:C.O3'/1 3.33 THR239:K.N/1
DA7:C.OP1/1 2.65 LYS236:K.NZ/1
DA7:C.OP1/1 3.32 THR239:K.N/1
DA8:C.OP1/1 3.05 LYS236:K.N/1
DA10:C.OP1/1 2.79 ARG158:K.NH1/1
DA10:C.OP2/1 2.86 GLN165:K.N/1
DA11:C.OP2/1 2.42 GLN165:K.NE2/1
DA11:C.OP2/1 3.14 SER186:K.OG/1
DA11:C.N7/1 3.31 GLN182:K.NE2/1
DT12:C.O4/1 2.81 SER183:K.OG/1
DT9:D.OP1/1 2.89 GLN165:L.N/1
DT9:D.OP2/1 3.41 THR166:L.N/1
DT9:D.O3'/1 2.79 GLN165:L.NE2/1
DA10:D.N7/1 2.9 GLN182:L.NE2/1
DA10:D.N6/1 2.91 GLN182:L.OE1/1
DG12:D.OP1/1 3.48 ARG237:K.NH2/1
DG12:D.N7/1 2.9 ARG187:L.NH2/1
DG12:D.O6/1 2.89 ARG187:L.NH1/1
DG12:D.O6/1 3.3 ARG187:L.NH2/1
DC13:D.N4/1 3.49 ARG187:L.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA13:C.N7/1 2.67 67:C/1 3.03 ARG187:K.NH1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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