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Nucleic atom dist Protein atom
DC3:E.N4/1 3.38 SER183:N.OG/1
DT5:E.O2/1 2.37 ARG238:M.NH2/1
DA6:E.O3'/1 3.08 THR239:M.N/1
DA7:E.N7/1 3.21 ASN284:M.ND2/1
DA7:E.N6/1 3.19 ASN284:M.OD1/1
DA8:E.OP1/1 3.12 LYS236:M.N/1
DA10:E.OP1/1 2.75 ARG158:M.NH1/1
DA10:E.OP2/1 2.85 GLN165:M.N/1
DA11:E.OP2/1 2.83 GLN165:M.NE2/1
DA11:E.OP2/1 2.7 SER186:M.OG/1
DA11:E.N7/1 3.04 GLN182:M.NE2/1
DA11:E.N6/1 3.03 GLN182:M.OE1/1
DT12:E.OP2/1 2.86 LYS190:M.NZ/1
DT12:E.O4/1 2.26 SER183:M.OG/1
DT9:F.OP1/1 3.04 GLN165:N.N/1
DT9:F.OP2/1 2.82 THR166:N.N/1
DA10:F.OP2/1 2.88 GLN165:N.NE2/1
DA10:F.OP2/1 2.94 SER186:N.OG/1
DA10:F.N7/1 2.94 GLN182:N.NE2/1
DA10:F.N6/1 2.8 GLN182:N.OE1/1
DT11:F.O4/1 2.95 SER183:N.OG/1
DG12:F.OP1/1 2.81 ARG237:M.NH2/1
DG12:F.N7/1 3.5 ARG187:N.NH2/1
DG12:F.O6/1 2.79 ARG187:N.NH1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA6:E.OP2/1 3.01 63:M/1 2.7 ASN284:M.ND2/1
DA6:E.N3/1 3.19 9:M/1 2.83 ARG235:M.NH2/1
DA7:E.OP2/1 2.61 16:E/1 2.93 VAL277:M.O/1
DA7:E.N3/1 3.14 16:F/1 3.27 ARG235:M.NH2/1
DA8:E.O4'/1 2.96 16:F/1 3.27 ARG235:M.NH2/1
DT8:F.OP1/1 2.95 11:N/1 2.9 THR164:N.OG1/1
DT9:F.O2/1 2.66 16:F/1 3.27 ARG235:M.NH2/1
DA10:F.N3/1 2.48 17:F/1 2.9 ARG238:M.NE/1
DT11:F.O4'/1 2.98 17:F/1 2.9 ARG238:M.NE/1
DG12:F.OP1/1 2.62 19:F/1 2.97 ARG238:M.N/1
DC13:F.N4/1 2.69 24:F/1 2.78 ARG187:N.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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