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Nucleic atom dist Protein atom
DG406:F.OP1/1 2.67 SER486:B.OG/1
5CM407:F.OP1/1 2.85 GLY453:B.N/1
5CM407:F.OP2/1 2.91 TYR471:B.OH/1
DG408:F.OP1/1 2.9 ARG438:B.NH1/1
DC409:F.OP1/1 3 ARG438:B.N/1
DC426:G.OP2/1 2.82 ASN494:B.ND2/1
DG427:G.N7/1 3.17 ARG496:B.NH2/1
DG427:G.O6/1 2.77 ARG496:B.NE/1
DC428:G.O2/1 2.6 HIS450:B.NE2/1
DG432:G.OP1/1 2.87 HIS455:B.NE2/1
DG432:G.OP1/1 3.06 ARG457:B.NE/1
DG432:G.OP2/1 3.09 ARG457:B.NH2/1
DG433:G.OP1/1 2.88 SER458:B.N/1
DG433:G.OP1/1 2.72 SER458:B.OG/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG406:F.N2/1 3.17 1:F/1 3.19 VAL451:B.N/1
DG406:F.N2/1 3.17 1:F/1 3.43 ALA452:B.N/1
5CM407:F.OP2/1 2.92 47:B/1 2.82 ARG489:B.NH1/1
DG408:F.O6/1 3.06 83:B/1 2.89 ARG496:B.N/1
DC409:F.OP1/1 2.84 5:F/1 2.99 ARG438:B.N/1
DC409:F.OP1/1 2.84 5:F/1 2.92 VAL439:B.N/1
DC409:F.OP2/1 2.96 32:F/1 3.33 ASN557:B.ND2/1
DG425:G.O6/1 3.15 83:B/1 2.89 ARG496:B.N/1
DG425:G.O6/1 3.15 83:B/1 3.25 THR497:B.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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