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Nucleic atom dist Protein atom
DA2:D.OP1/1 2.94 TYR452:B.N/1
DG3:D.OP2/1 3.08 TYR452:B.OH/1
DG3:D.N7/1 3.16 LYS461:B.NZ/1
DG3:D.O6/1 3.22 LYS461:B.NZ/1
DG12:D.OP1/1 2.94 ARG489:A.NE/1
DG12:D.OP2/1 2.84 ARG496:A.NH1/1
DG12:D.OP2/1 3.06 ARG496:A.NH2/1
DG12:D.N7/1 3.03 ARG466:A.NH1/1
DG12:D.O6/1 2.8 ARG466:A.NH2/1
DA2:C.OP1/1 3.23 TYR452:A.N/1
DA2:C.O4'/1 3.34 ARG510:A.NH2/1
DG3:C.OP2/1 2.54 TYR452:A.OH/1
DT10:C.OP1/1 3.26 LYS490:A.NZ/1
DG12:C.OP1/1 2.87 ARG489:B.NE/1
DG12:C.OP2/1 2.79 ARG496:B.NH1/1
DG12:C.OP2/1 2.95 ARG496:B.NH2/1
DG12:C.N7/1 2.89 ARG466:B.NH1/1
DG12:C.O6/1 2.78 ARG466:B.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT11:D.OP1/1 2.89 5:A/1 2.87 ARG489:A.O/1
DT11:D.OP1/1 2.89 5:A/1 2.97 ARG496:A.NH1/1
DG12:D.OP2/1 2.9 70:D/1 2.56 SER459:A.O/1
DT13:D.OP2/1 2.52 32:D/1 3.1 SER459:A.N/1
DA4:C.OP2/1 2.94 39:A/1 2.49 LYS465:A.NZ/1
DA5:C.N6/1 2.74 53:C/1 3.24 ARG466:A.NH2/1
DT11:C.OP1/1 2.9 25:B/1 2.69 ARG489:B.O/1
DT11:C.OP1/1 2.9 25:B/1 2.88 ARG496:B.NH1/1
DG12:C.OP2/1 2.86 37:B/1 2.76 SER459:B.O/1
DT13:C.OP2/1 2.96 49:B/1 2.46 SER459:B.OG/1
DT13:C.OP2/1 2.96 49:B/1 3.22 ARG489:B.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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