Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DG806:D.OP2/1 2.52 LYS339:A.NZ/1
DA807:D.OP1/1 3.21 THR301:A.N/1
DA807:D.OP2/1 2.76 THR301:A.OG1/1
DT808:D.OP1/1 2.88 LYS321:A.NZ/1
DT808:D.OP2/1 2.58 GLY299:A.N/1
DG809:D.OP2/1 2.74 SER297:A.N/1
DG809:D.OP2/1 3.25 SER297:A.O/1
DA812:D.OP1/1 2.84 GLY187:A.N/1
DA812:D.OP1/1 2.77 THR190:A.N/1
DA812:D.OP1/1 2.68 THR190:A.OG1/1
DA812:D.OP2/1 3.21 ILE189:A.N/1
DG813:D.OP1/1 2.89 GLY185:A.N/1
DG813:D.O3'/1 3.14 LYS152:A.NZ/1
DT902:E.OP1/1 2.9 ARG36:A.NH1/1
DA904:E.OP1/1 2.55 GLY41:A.N/1
DA904:E.OP2/1 2.71 ARG331:A.NH2/1
DC905:E.OP1/1 3.08 ARG331:A.NH2/1
DC905:E.O4'/1 3.19 ALA42:A.N/1
DC907:E.OP1/1 2.74 ARG247:A.NH1/1
DC907:E.OP2/1 2.59 ILE248:A.N/1
DC907:E.OP2/1 3.23 ILE248:A.O/1
DT908:E.OP2/1 2.8 GLY246:A.N/1
DT908:E.OP2/1 3.1 GLY246:A.O/1
DT908:E.OP2/1 2.3 ARG336:A.NH2/1
DA909:E.OP1/1 3.05 LYS243:A.N/1
DA909:E.OP2/1 3.11 LYS243:A.N/1
DA909:E.OP2/1 3.09 SER244:A.N/1
DA909:E.OP2/1 3.12 SER244:A.OG/1
DA912:E.OP1/1 2.73 ALA220:A.N/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DG806:D.OP2/1 2.9 692:A/1 2.43 LYS339:A.NZ/1
DA807:D.OP1/1 2.69 544:D/1 2.8 GLY299:A.O/1
DA807:D.OP2/1 2.57 515:D/1 3.08 HIS285:A.NE2/1
DT811:D.OP1/1 2.58 686:D/1 2.63 LYS193:A.NZ/1
DG813:D.OP1/1 2.37 516:D/1 2.54 VAL183:A.O/1
DG813:D.OP1/1 2.37 516:D/1 2.84 ILE186:A.O/1
2DA814:D.OP2/1 3.15 717:D/1 2.84 ASP156:A.OD1/1
DC901:E.O5'/1 2.95 595:A/1 3.22 ARG36:A.NH2/1
DC901:E.O5'/1 2.95 595:A/1 2.9 ASN254:A.N/1
DC901:E.O5'/1 2.95 595:A/1 3.22 ASN254:A.ND2/1
DC905:E.OP1/1 2.38 714:E/1 2.59 THR250:A.OG1/1
DC905:E.OP1/1 2.38 714:E/1 3.37 ARG331:A.NE/1
DC905:E.OP1/1 2.38 714:E/1 3.28 ARG331:A.NH2/1
DT908:E.OP1/1 2.56 698:E/1 3.16 ARG242:A.NH1/1
DA909:E.OP1/1 2.43 715:E/1 2.69 VAL241:A.O/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text