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Nucleic atom dist Protein atom
DG3:B.OP1/1 2.91 LYS156:A.N/1
DG3:B.OP2/1 2.88 THR155:A.OG1/1
DC9:B.OP1/1 2.77 TRP30:A.NE1/1
DC9:B.OP1/1 3.41 ASN32:A.ND2/1
DC10:B.O2/1 2.83 ARG112:A.NH1/1
DG11:B.O4'/1 3.05 ARG112:A.NH1/1
DG11:B.O4'/1 3.27 ARG112:A.NH2/1
DG8:C.OP1/1 2.73 LYS258:A.NZ/1
DG10:C.OP2/1 3.06 ASN174:A.N/1
DG10:C.OP2/1 2.4 ARG264:A.NH2/1
DG10:C.N3/1 2.9 ARG76:A.NE/1
DT11:C.OP1/1 2.76 HIS74:A.NE2/1
DC12:C.OP1/1 2.77 PRO130:A.O/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC8:B.O2/1 2.9 317:A/1 3.01 ARG35:A.NH1/1
DC10:B.OP2/1 2.84 237:B/1 3.21 LYS113:A.NZ/1
DG11:B.OP1/1 2.63 327:A/1 2.69 VAL111:A.O/1
DG11:B.N3/1 2.96 378:A/1 3.36 ARG112:A.NH2/1
DG10:C.OP1/1 2.76 298:A/1 2.75 GLU3:A.OE1/1
DG10:C.OP1/1 2.78 315:A/1 2.71 GLU3:A.OE2/1
DG10:C.OP1/1 2.78 315:A/1 2.51 LYS60:A.NZ/1
DG10:C.OP1/1 2.76 298:A/1 3.04 ILE175:A.N/1
DG10:C.OP2/1 2.7 365:A/1 2.88 ARG264:A.NH1/1
DG10:C.OP2/1 2.7 365:A/1 3.19 ARG264:A.NH2/1
DG10:C.N2/1 2.83 515:A/1 2.64 PHE114:A.O/1
DT11:C.OP1/1 2.68 309:A/1 2.87 LYS60:A.N/1
DT11:C.OP2/1 2.51 314:A/1 2.61 LYS60:A.NZ/1
DT11:C.OP2/1 2.9 387:A/1 2.77 GLY171:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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