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Nucleic atom dist Protein atom
U2:R.OP2/1 2.66 ARG1124:B.NH2/1
G6:R.O2'/1 2.82 GLN481:B.NE2/1
G8:R.N7/1 3.42 GLN531:B.OE1/1
G9:R.OP1/1 2.77 GLN776:B.NE2/1
G9:R.O3'/1 3.26 LYS979:B.NZ/1
A10:R.OP1/1 3.17 LYS979:B.NZ/1
A10:R.O2'/1 2.82 ARG446:A.NH2/1
U11:R.OP1/1 2.25 ASP483:A.OD1/1
G12:R.O2'/1 2.45 TYR769:B.OH/1
G12:R.N2/1 2.53 LEU824:A.O/1
G12:R.N3/1 2.56 THR827:A.OG1/1
DC16:T.OP2/1 3.13 GLU1403:A.O/1
DG17:T.OP1/1 2.67 ARG337:A.NH2/1
DC20:T.OP1/1 2.67 ARG1129:B.NE/1
DC21:T.OP1/1 3.4 ARG344:A.NH1/1
DC21:T.OP1/1 3.34 ARG1129:B.N/1
DC21:T.OP2/1 2.52 ARG344:A.NH2/1
DT22:T.OP1/1 3.24 ARG1122:B.N/1
DT24:T.OP1/1 2.77 ARG857:B.NH2/1
DT24:T.OP1/1 3.38 ARG942:B.NH2/1
DC25:T.OP2/1 3.15 THR791:B.OG1/1
DT2:N.OP2/1 3.09 ASN1110:A.ND2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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