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Nucleic atom dist Protein atom
DA18:B.OP1/1 2.72 LYS246:A.NZ/1
DA18:B.OP2/1 2.93 THR242:A.OG1/1
DA18:B.O4'/1 2.58 ARG129:A.NH1/1
DG20:B.OP1/1 3.17 THR242:A.N/1
DG20:B.O5'/1 3.03 ASN127:A.N/1
DG20:B.O4'/1 3.18 ASN127:A.N/1
DT21:B.OP1/1 2.75 GLY220:A.N/1
DT21:B.OP1/1 2.81 VAL223:A.N/1
DC22:B.OP1/1 2.79 GLY218:A.N/1
DC9:C.O4'/1 3.03 PHE179:A.N/1
DC9:C.O2/1 3 ARG180:A.NH1/1
DC9:C.N3/1 3.06 ARG180:A.NH2/1
DC9:C.N4/1 3.17 ASN127:A.OD1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG20:B.OP2/1 2.84 83:B/1 3.25 ASN127:A.ND2/1
DG20:B.N2/1 3.21 424:A/1 2.63 TYR183:A.OH/1
DT21:B.O2/1 2.66 424:A/1 2.63 TYR183:A.OH/1
DC9:C.O2/1 3.17 446:A/1 3.03 ASN128:A.OD1/1
DC9:C.N4/1 2.99 409:A/1 2.82 ASN127:A.OD1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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