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Nucleic atom dist Protein atom
DG5:Q.OP1/1 2.87 ARG454:B.NH2/1
DA6:Q.OP1/1 3.19 THR473:B.N/1
DA7:Q.OP2/1 2.78 ALA471:B.N/1
DG8:Q.OP1/1 3.22 ARG470:B.NH1/1
DA10:Q.OP1/1 3.3 ARG63:B.NH1/1
DC11:Q.OP1/1 3.01 GLY358:B.N/1
DC11:Q.OP1/1 2.79 THR361:B.N/1
DC11:Q.OP2/1 3.1 VAL360:B.N/1
DT12:Q.OP1/1 2.73 GLY356:B.N/1
DA4:U.N6/1 2.86 THR44:B.OG1/1
DG6:U.OP1/1 2.42 THR421:B.N/1
DG6:U.OP2/1 3.19 THR421:B.OG1/1
DA7:U.OP2/1 2.82 GLU419:B.N/1
DA7:U.OP2/1 3.27 GLU419:B.O/1
DG8:U.OP1/1 2.56 ARG413:B.NH1/1
DG8:U.OP2/1 2.93 SER417:B.N/1
DT9:U.OP1/1 2.71 LYS414:B.N/1
DT9:U.OP2/1 3.09 SER415:B.OG/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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