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Nucleic atom dist Protein atom
DG1:D.OP2/1 2.78 LYS68:A.NZ/1
DT2:D.OP1/1 2.98 GLY66:A.N/1
DT2:D.OP1/1 2.77 ILE69:A.N/1
DT2:D.OP2/1 3.29 LYS68:A.N/1
DC3:D.OP1/1 2.78 GLY64:A.N/1
DC8:P.OP1/1 3.01 GLY107:A.N/1
DC8:P.OP1/1 2.81 ALA110:A.N/1
DC8:P.OP2/1 3.01 SER109:A.N/1
DG9:P.OP1/1 2.74 GLY105:A.N/1
DOC10:P.OP1/1 2.96 ARG254:A.NH2/1
DC6:T.OP2/1 2.71 LYS280:A.NZ/1
DC6:T.O2/1 2.94 ARG283:A.NH1/1
DG7:T.OP1/1 2.82 THR292:A.OG1/1
DC8:T.OP1/1 3.14 ASN294:A.ND2/1
DG9:T.OP1/1 2.51 TYR296:A.OH/1
DC10:T.OP1/1 2.99 THR233:A.N/1
DC10:T.OP1/1 3.03 LYS234:A.N/1
DA11:T.OP1/1 3.05 LYS230:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG1:D.OP2/1 3.2 455:A/1 2.86 TYR39:A.OH/1
DG1:D.OP2/1 3.2 455:A/1 2.81 LYS72:A.NZ/1
DC3:D.OP2/1 2.79 325:D/1 3.17 LYS60:A.NZ/1
DG9:P.OP2/1 2.68 41:P/1 2.99 THR101:A.O/1
DOC10:P.OP1/1 3.08 403:A/1 2.89 SER104:A.OG/1
DOC10:P.OP1/1 2.76 100:P/1 2.87 ASP190:A.OD2/1
DOC10:P.OP1/1 3.08 403:A/1 2.78 ARG254:A.NE/1
DC6:T.N4/1 2.96 17:T/1 3.07 ASN37:A.ND2/1
DG7:T.OP1/1 3.03 525:A/1 2.64 ARG283:A.O/1
DG7:T.OP1/1 3.03 525:A/1 2.96 ILE293:A.N/1
DG7:T.N3/1 2.8 409:A/1 2.91 ARG283:A.NH1/1
DG7:T.N3/1 2.8 409:A/1 2.56 GLU295:A.OE1/1
DC8:T.O4'/1 3.21 409:A/1 2.91 ARG283:A.NH1/1
DC8:T.O4'/1 3.21 409:A/1 2.56 GLU295:A.OE1/1
DC8:T.O2/1 3.02 411:A/1 2.59 GLU295:A.OE2/1
DG9:T.N2/1 3.08 404:A/1 3.15 SER229:A.OG/1
DG9:T.N2/1 3.08 404:A/1 2.66 LYS234:A.NZ/1
DC10:T.OP2/1 2.65 63:T/1 2.83 GLU232:A.N/1
DC10:T.OP2/1 2.74 198:T/1 2.95 THR233:A.OG1/1
DT12:T.OP1/1 2.62 657:A/1 2.86 HIS134:A.N/1
DT12:T.OP1/1 3 64:T/1 3.16 HIS135:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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