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Nucleic atom dist Protein atom
DG1:D.OP1/1 3.32 LYS68:A.NZ/1
DT2:D.OP1/1 2.92 GLY66:A.N/1
DT2:D.OP1/1 2.84 ILE69:A.N/1
DT2:D.OP2/1 3.29 LYS68:A.N/1
DC3:D.OP1/1 2.95 GLY64:A.N/1
DC8:P.OP1/1 3.12 GLY107:A.N/1
DC8:P.OP1/1 2.8 ALA110:A.N/1
DC8:P.OP2/1 3.05 SER109:A.N/1
DG9:P.OP1/1 2.74 GLY105:A.N/1
DOC10:P.OP1/1 2.84 ARG254:A.NH2/1
DC6:T.OP2/1 2.72 LYS280:A.NZ/1
DC6:T.O2/1 2.88 ARG283:A.NH1/1
DG7:T.OP1/1 2.88 THR292:A.OG1/1
DC8:T.OP1/1 3.11 ASN294:A.ND2/1
DG9:T.OP1/1 2.65 TYR296:A.OH/1
DC10:T.OP1/1 2.97 THR233:A.N/1
DC10:T.OP1/1 2.95 LYS234:A.N/1
DA11:T.OP1/1 3.02 LYS230:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG1:D.OP1/1 2.54 390:D/1 3.17 LYS68:A.NZ/1
DG1:D.OP2/1 2.7 475:A/1 2.65 TYR39:A.OH/1
DG1:D.OP2/1 2.7 475:A/1 2.76 LYS72:A.NZ/1
DC3:D.OP2/1 2.71 157:D/1 3.26 LYS60:A.NZ/1
DG9:P.OP2/1 2.56 326:P/1 2.79 LYS27:A.NZ/1
DG9:P.OP2/1 2.56 88:P/1 3.08 THR101:A.O/1
DG9:P.N3/1 2.91 122:P/1 2.98 LYS234:A.NZ/1
DOC10:P.O4'/1 2.79 122:P/1 2.98 LYS234:A.NZ/1
DOC10:P.OP1/1 2.91 382:A/1 2.91 SER104:A.OG/1
DOC10:P.OP1/1 2.91 382:A/1 2.84 ARG254:A.NE/1
DC5:T.O2/1 2.97 196:T/1 3.2 HIS34:A.O/1
DC6:T.N4/1 3.06 375:A/1 2.93 ASN37:A.ND2/1
DG7:T.OP1/1 2.66 42:T/1 2.75 ARG283:A.O/1
DG7:T.OP1/1 2.66 42:T/1 3.01 ILE293:A.N/1
DG7:T.N2/1 3.2 409:A/1 3.37 ARG258:A.NH1/1
DG7:T.N2/1 3.25 436:A/1 2.71 ARG283:A.NH1/1
DG7:T.N2/1 3.25 436:A/1 2.67 GLU295:A.OE1/1
DG7:T.N2/1 3.2 409:A/1 2.7 GLU295:A.OE2/1
DG7:T.N3/1 2.77 436:A/1 2.71 ARG283:A.NH1/1
DG7:T.N3/1 2.77 436:A/1 2.67 GLU295:A.OE1/1
DC8:T.O2/1 2.96 409:A/1 2.7 GLU295:A.OE2/1
DG9:T.O4'/1 2.86 154:T/1 3.48 ARG258:A.NH1/1
DG9:T.N2/1 2.95 477:A/1 2.59 LYS234:A.NZ/1
DG9:T.N3/1 3.32 477:A/1 2.59 LYS234:A.NZ/1
DC10:T.OP2/1 2.65 56:T/1 3.03 GLU232:A.N/1
DC10:T.OP2/1 3.01 481:A/1 2.89 THR233:A.OG1/1
DC10:T.O4'/1 2.69 477:A/1 2.59 LYS234:A.NZ/1
DA11:T.OP1/1 3.14 595:A/1 2.68 LYS230:A.O/1
DT12:T.OP1/1 2.44 166:T/1 2.88 HIS134:A.N/1
DT12:T.OP1/1 2.87 20:T/1 3.13 HIS135:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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