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Nucleic atom dist Protein atom
DG1:D.OP1/1 3.04 LYS68:A.NZ/1
DG1:D.OP2/1 2.9 LYS68:A.NZ/1
DT2:D.OP1/1 2.96 GLY66:A.N/1
DT2:D.OP1/1 2.8 ILE69:A.N/1
DT2:D.OP2/1 3.26 LYS68:A.N/1
DC3:D.OP1/1 2.84 GLY64:A.N/1
DC8:P.OP1/1 3.05 GLY107:A.N/1
DC8:P.OP1/1 2.77 ALA110:A.N/1
DC8:P.OP2/1 2.97 SER109:A.N/1
DG9:P.OP1/1 2.85 GLY105:A.N/1
DOC10:P.OP1/1 2.78 ARG254:A.NH2/1
DC6:T.OP2/1 2.79 LYS280:A.NZ/1
DC6:T.O2/1 2.99 ARG283:A.NH1/1
DG7:T.OP1/1 2.79 THR292:A.OG1/1
DC8:T.OP1/1 3.23 ASN294:A.ND2/1
DG9:T.OP1/1 2.73 TYR296:A.OH/1
DC10:T.OP1/1 2.93 THR233:A.N/1
DC10:T.OP1/1 2.93 LYS234:A.N/1
DA11:T.OP1/1 2.99 LYS230:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG1:D.OP2/1 3.02 595:A/1 2.82 TYR39:A.OH/1
DG1:D.OP2/1 3.02 595:A/1 2.85 LYS72:A.NZ/1
DC3:D.OP2/1 2.81 182:D/1 3.24 LYS60:A.NZ/1
DG9:P.OP2/1 2.64 394:P/1 3.03 LYS27:A.NZ/1
DG9:P.OP2/1 2.73 103:P/1 2.88 THR101:A.O/1
DOC10:P.OP1/1 3.19 405:A/1 2.73 SER104:A.OG/1
DOC10:P.OP1/1 2.5 74:P/1 2.8 ASP190:A.OD2/1
DOC10:P.OP1/1 3.19 405:A/1 2.99 ARG254:A.NE/1
DC6:T.N4/1 2.98 17:T/1 3.05 ASN37:A.ND2/1
DG7:T.OP1/1 2.74 57:T/1 2.77 ARG283:A.O/1
DG7:T.OP1/1 2.74 57:T/1 2.89 ILE293:A.N/1
DG7:T.N2/1 3.18 581:A/1 2.43 TYR271:A.OH/1
DG7:T.N3/1 2.87 422:A/1 2.76 ARG283:A.NH1/1
DG7:T.N3/1 2.87 422:A/1 2.75 GLU295:A.OE1/1
DC8:T.O2/1 3.07 398:A/1 2.5 GLU295:A.OE2/1
DG9:T.N2/1 2.93 423:A/1 2.54 LYS234:A.NZ/1
DC10:T.OP2/1 2.84 102:T/1 2.87 GLU232:A.N/1
DC10:T.OP2/1 3.05 505:A/1 2.75 THR233:A.OG1/1
DA11:T.OP1/1 3.1 522:A/1 2.65 LYS230:A.O/1
DA11:T.OP2/1 2.69 670:A/1 2.84 LYS230:A.O/1
DA11:T.O3'/1 3.01 65:T/1 3.11 HIS135:A.N/1
DT12:T.OP1/1 2.45 176:T/1 2.93 HIS134:A.N/1
DT12:T.OP1/1 2.77 65:T/1 3.11 HIS135:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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