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Nucleic atom dist Protein atom
DC9:B.O2/1 2.82 ARG112:A.NE/1
DC9:B.N3/1 3.48 ARG112:A.NH1/1
DT10:B.OP1/1 2.86 LYS113:A.NZ/1
DG11:B.OP1/1 3.18 HIS93:A.NE2/1
DA8:C.OP1/1 3.01 LYS258:A.NZ/1
DG10:C.OP1/1 2.89 LYS60:A.NZ/1
DT11:C.OP1/1 3.16 HIS74:A.NE2/1
DT11:C.OP2/1 2.89 LYS60:A.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC12:C.OP1/1 2.59 23:C/1 3.32 ARG76:A.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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