|
Nucleic atom
|
dist
|
Protein atom
|
|
DA803:T.OP1/1
|
3.2
|
HIS258:A.NE2/1
|
|
DT804:T.OP2/1
|
2.95
|
VAL370:A.N/1
|
|
DT806:T.O3'/1
|
2.92
|
GLY401:A.N/1
|
|
DA807:T.OP1/1
|
3.27
|
GLY401:A.N/1
|
|
DG809:T.OP1/1
|
3.12
|
LYS614:A.N/1
|
|
DC810:T.OP1/1
|
3.3
|
ARG616:A.NH2/1
|
|
DC810:T.OP2/1
|
2.74
|
ARG607:A.N/1
|
|
DT811:T.OP2/1
|
3.12
|
ARG607:A.NH1/1
|
|
DA812:T.OP2/1
|
3.04
|
ARG755:A.NE/1
|
|
DG813:T.OP1/1
|
3.24
|
ARG704:A.NH1/1
|
|
DG813:T.O3'/1
|
3.3
|
VAL699:A.N/1
|
|
DG814:T.OP1/1
|
3.02
|
VAL699:A.N/1
|
|
DC909:P.OP1/1
|
3.23
|
ARG689:A.N/1
|
|
DC909:P.OP1/1
|
2.77
|
TYR695:A.OH/1
|
|
DC909:P.OP1/1
|
3.09
|
HIS702:A.NE2/1
|
|
DC909:P.OP2/1
|
3.04
|
ARG689:A.NE/1
|
|
DG910:P.OP1/1
|
2.86
|
ARG687:A.N/1
|
|
DG910:P.OP2/1
|
2.97
|
ARG687:A.NH1/1
|
|
DG910:P.N3/1
|
3.04
|
ARG638:A.NH1/1
|
|
DT911:P.OP1/1
|
3.18
|
VAL637:A.O/1
|
|
DT911:P.OP1/1
|
3
|
THR639:A.N/1
|
|
DA912:P.OP1/1
|
2.72
|
GLY633:A.N/1
|
|
DA912:P.N3/1
|
2.94
|
LYS615:A.NZ/1
|
|
DOC913:P.OP1/1
|
2.42
|
TYR617:A.OH/1
|
|
|
|
Nucleic atom
|
d_n2w
|
water
|
d_p2w
|
Protein atom
|
|
DA803:T.OP2/1
|
2.7
|
1314:T/1
|
2.72
|
GLY368:A.N/1
|
|
DT804:T.OP1/1
|
2.76
|
1314:T/1
|
2.72
|
GLY368:A.N/1
|
|
DT804:T.OP1/1
|
2.96
|
926:A/1
|
3.21
|
SER369:A.N/1
|
|
DT804:T.OP1/1
|
2.96
|
926:A/1
|
2.84
|
SER369:A.OG/1
|
|
DT804:T.OP2/1
|
2.7
|
39:T/1
|
2.95
|
ALA371:A.N/1
|
|
DT806:T.OP1/1
|
3.27
|
1239:A/1
|
2.62
|
GLY504:A.O/1
|
|
DT806:T.O2/1
|
2.59
|
239:T/1
|
2.82
|
GLY402:A.N/1
|
|
DA807:T.O4'/1
|
3.08
|
844:A/1
|
2.91
|
LYS615:A.NZ/1
|
|
DC808:T.OP1/1
|
2.53
|
54:T/1
|
3.18
|
VAL404:A.N/1
|
|
DG809:T.OP1/1
|
2.73
|
183:T/1
|
2.84
|
GLY612:A.O/1
|
|
DG809:T.OP1/1
|
2.73
|
183:T/1
|
3.39
|
LYS614:A.NZ/1
|
|
DC810:T.OP1/1
|
2.81
|
839:A/1
|
2.94
|
SER613:A.OG/1
|
|
DC810:T.OP1/1
|
2.81
|
839:A/1
|
2.8
|
ARG616:A.NE/1
|
|
DT811:T.OP1/1
|
2.81
|
854:A/1
|
2.54
|
GLU635:A.OE2/1
|
|
DT811:T.OP1/1
|
2.96
|
885:A/1
|
2.69
|
ARG755:A.O/1
|
|
DA907:P.N3/1
|
2.91
|
347:P/1
|
3.29
|
ASN698:A.ND2/1
|
|
DG908:P.OP1/1
|
2.62
|
285:P/1
|
3.09
|
ASN698:A.N/1
|
|
DG908:P.OP1/1
|
2.62
|
285:P/1
|
2.71
|
ASN698:A.O/1
|
|
DG908:P.OP1/1
|
2.62
|
285:P/1
|
2.91
|
ASN698:A.OD1/1
|
|
DC909:P.OP2/1
|
2.77
|
323:P/1
|
3.14
|
ARG689:A.NH2/1
|
|
DG910:P.OP1/1
|
2.75
|
887:P/1
|
2.84
|
THR639:A.OG1/1
|
|
DG910:P.OP1/1
|
2.75
|
887:P/1
|
2.75
|
ARG685:A.O/1
|
|
DG910:P.N7/1
|
2.98
|
839:P/1
|
3
|
ARG689:A.NH1/1
|
|
DT911:P.OP2/1
|
2.89
|
1072:A/1
|
2.72
|
THR639:A.OG1/1
|
|
DT911:P.OP2/1
|
2.89
|
1072:A/1
|
2.92
|
ARG687:A.NH1/1
|
|
DT911:P.OP2/1
|
2.89
|
1072:A/1
|
2.95
|
ARG687:A.NH2/1
|
|
DA912:P.OP1/1
|
2.69
|
176:P/1
|
2.95
|
PHE631:A.O/1
|
|
DA912:P.O3'/1
|
2.99
|
789:A/1
|
2.71
|
TYR543:A.OH/1
|
|
DA912:P.O3'/1
|
2.99
|
789:A/1
|
2.67
|
ASP545:A.OD2/1
|
|
DOC913:P.OP1/1
|
2.96
|
789:A/1
|
2.71
|
TYR543:A.OH/1
|
|
DOC913:P.OP1/1
|
2.96
|
789:A/1
|
2.67
|
ASP545:A.OD2/1
|
|
DOC913:P.OP1/1
|
3.16
|
802:A/1
|
2.67
|
SER548:A.OG/1
|
|
|
Hbonds:
Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
Protein atom is atom of protein in Jmol/RasMol format.
Dist is distance from nucleic atom to protein atom in angstroms (Å).
W-Bridges:
W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
Protein atom is atom of protein in Jmol/RasMol format.
Water is water molecule.
d_n2w is distance from nucleic atom to water molecule (Å).
d_p2w is distance from protein atom to water molecule (Å).
CluD:
CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
Core number is serial number of cluster.
Atoms is number of detected atoms in the cluster.
