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Nucleic atom dist Protein atom
DC3:C.OP1/1 2.85 HIS101:B.NE2/1
DG5:C.N7/1 3.18 ARG74:B.NH1/1
DG5:C.O6/1 3 ARG74:B.NH2/1
DT8:C.OP2/1 2.93 SER78:A.N/1
DA9:C.OP2/1 2.96 GLN76:A.N/1
DA9:C.N7/1 3.42 GLN76:A.OE1/1
DA9:C.N7/1 3.18 LYS81:A.NZ/1
DA9:C.N6/1 3.1 GLN76:A.OE1/1
DG10:C.OP2/1 2.98 LEU71:A.N/1
DG6:D.N7/1 3.1 ARG74:A.NH1/1
DG6:D.O6/1 2.85 ARG74:A.NH2/1
DT9:D.OP2/1 3.05 SER78:B.N/1
DA10:D.OP2/1 2.8 GLN76:B.N/1
DA10:D.N7/1 3.36 GLN76:B.OE1/1
DA10:D.N7/1 3.05 LYS81:B.NZ/1
DA10:D.N6/1 3.12 GLN76:B.OE1/1
DG11:D.OP2/1 2.86 LEU71:B.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT8:C.OP1/1 2.77 7:A/1 2.48 LYS39:A.NZ/1
DT8:C.OP1/1 2.57 16:C/1 2.79 GLN76:A.O/1
DT9:D.OP1/1 2.87 4:B/1 2.69 GLN76:B.O/1
DA10:D.OP1/1 2.58 18:D/1 2.77 LYS40:B.NZ/1
DA10:D.OP2/1 2.44 17:D/1 2.72 LYS81:B.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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