Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DT3:E.O4'/1 2.87 ASN572:B.ND2/1
DT5:E.OP1/1 3.03 ASN572:B.ND2/1
DA7:E.OP1/1 3 GLY393:B.N/1
DA8:E.OP1/1 2.72 LYS705:B.NZ/1
DT13:E.OP1/1 2.83 LYS844:B.NZ/1
DC14:E.OP1/1 2.95 LYS800:B.N/1
DT107:F.O4'/1 3.35 LYS800:B.NZ/1
DG108:F.OP1/1 2.67 LYS790:B.NZ/1
DG108:F.OP1/1 2.58 TYR791:B.OH/1
DC109:F.OP1/1 3.24 ASN786:B.N/1
DC109:F.OP1/1 3.01 HIS804:B.NE2/1
DC109:F.OP2/1 2.95 ASN786:B.OD1/1
DT110:F.OP1/1 3.09 SER784:B.N/1
DT110:F.OP2/1 2.71 SER784:B.OG/1
DT111:F.OP1/1 2.72 SER735:B.N/1
DT111:F.OP1/1 2.63 SER735:B.OG/1
DT111:F.OP2/1 2.69 ASN284:B.ND2/1
DA112:F.OP1/1 2.87 GLY729:B.N/1
DA112:F.N3/1 2.97 LYS706:B.NZ/1
DA113:F.OP1/1 2.63 TYR708:B.OH/1
DA113:F.O3'/1 2.81 ASP623:B.OD2/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DT5:E.O2/1 2.82 636:E/1 2.8 TYR567:B.OH/1
DT6:E.O4'/1 2.75 636:E/1 2.8 TYR567:B.OH/1
DT6:E.O2/1 2.69 529:E/1 2.96 ALA394:B.N/1
DA7:E.O4'/1 2.74 571:E/1 2.82 LYS706:B.NZ/1
DA8:E.OP1/1 2.4 597:E/1 3.04 VAL396:B.N/1
DG9:E.OP1/1 2.62 759:E/1 2.67 GLU398:B.OE1/1
DG9:E.OP1/1 2.52 607:E/1 2.73 GLU398:B.OE2/1
DG9:E.OP1/1 2.52 607:E/1 2.8 LYS705:B.N/1
DG9:E.N2/1 3.4 1233:B/1 2.74 LYS734:B.NZ/1
DG9:E.N3/1 2.94 727:E/1 3.22 LYS734:B.NZ/1
DC10:E.OP1/1 2.51 693:E/1 2.94 THR703:B.O/1
DC10:E.OP1/1 2.51 693:E/1 2.98 THR703:B.OG1/1
DA11:E.OP1/1 2.85 1094:B/1 2.63 LYS874:B.O/1
DA11:E.O5'/1 2.89 1094:B/1 2.63 LYS874:B.O/1
DT13:E.OP1/1 2.66 673:E/1 2.79 CYS801:B.O/1
DT13:E.OP1/1 2.66 673:E/1 2.92 ARG806:B.NE/1
DG108:F.OP1/1 3.1 950:B/1 2.86 ASN787:B.OD1/1
DG108:F.O5'/1 2.9 950:B/1 2.86 ASN787:B.OD1/1
DT110:F.OP1/1 2.62 557:F/1 2.7 SER735:B.OG/1
DT110:F.OP1/1 2.62 557:F/1 3.07 LYS829:B.NZ/1
DT110:F.OP2/1 2.98 643:F/1 3.21 ASN284:B.ND2/1
DT110:F.O4'/1 3.05 1298:B/1 2.93 LYS734:B.NZ/1
DT110:F.O2/1 2.98 1233:B/1 2.74 LYS734:B.NZ/1
DA112:F.OP1/1 2.47 527:F/1 2.89 GLN733:B.NE2/1
DA112:F.O3'/1 3.04 1077:B/1 2.67 TYR619:B.OH/1
DA112:F.O3'/1 3.04 1077:B/1 2.45 ASP621:B.OD2/1
DA113:F.OP1/1 3.02 1077:B/1 2.67 TYR619:B.OH/1
DA113:F.OP1/1 3.02 1077:B/1 2.45 ASP621:B.OD2/1
DA113:F.OP1/1 2.85 1130:B/1 2.82 TYR626:B.OH/1
DA113:F.N3/1 3.17 1081:B/1 2.71 THR622:B.OG1/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

text