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Nucleic atom dist Protein atom
DT-65:I.OP1/1 3.05 ARG49:E.NE/1
DA-54:I.OP1/1 3.22 SER53:D.N/1
DG-53:I.OP1/1 3.34 ILE51:D.N/1
DG-53:I.OP2/1 2.02 TYR39:D.OH/1
DA-45:I.OP1/1 3.02 ARG30:D.NH1/1
DA-44:I.OP1/1 2.7 ARG32:C.NH1/1
DT-43:I.OP1/1 3.29 ARG17:C.NE/1
DT-43:I.OP2/1 2.51 ARG17:C.NH2/1
DG-34:I.OP1/1 2.55 SER84:D.N/1
DG-34:I.OP1/1 2.55 THR85:D.OG1/1
DG-34:I.O5'/1 3.24 ARG83:D.NH2/1
DG-24:I.OP2/1 2.83 SER86:A.N/1
DG-24:I.O5'/1 3.11 PHE84:A.O/1
DC-23:I.OP1/1 2.82 ARG72:A.NH1/1
DC-23:I.OP1/1 2.78 PHE84:A.N/1
DC-23:I.OP2/1 2.62 ARG72:A.NH2/1
DA-13:I.OP1/1 2.8 ARG63:A.NH1/1
DA-13:I.OP1/1 3.22 ARG36:B.NH1/1
DA-13:I.OP1/1 3.1 ARG36:B.NH2/1
DA-13:I.OP2/1 3.26 ARG36:B.NH1/1
DA-5:I.OP1/1 2.83 ARG42:A.NE/1
DA-5:I.OP1/1 2.58 ARG42:A.NH2/1
DG-3:I.OP1/1 2.68 VAL117:A.N/1
DG-3:I.OP1/1 3.09 THR118:A.N/1
DG-3:I.OP1/1 2.95 THR118:A.OG1/1
DC7:I.OP1/1 3.28 GLY48:F.N/1
DC7:I.O4'/1 2.8 ARG45:F.NH2/1
DC8:I.OP1/1 2.88 ILE46:F.N/1
DC8:I.O3'/1 3.06 GLY44:E.N/1
DG9:I.OP1/1 2.82 GLY44:E.N/1
DG9:I.OP1/1 2.84 VAL46:E.N/1
DG9:I.OP1/1 3.2 ALA47:E.N/1
DG9:I.N3/1 2.73 ARG40:E.NH2/1
DC10:I.OP1/1 2.72 TYR41:E.N/1
DA17:I.OP2/1 2.78 ARG69:E.NH2/1
DC18:I.OP1/1 2.96 LYS64:E.N/1
DC18:I.OP2/1 3.1 LEU65:E.N/1
DG26:I.O3'/1 3.45 ARG83:E.NH2/1
DG27:I.OP1/1 3.19 LYS79:F.NZ/1
DG28:I.OP1/1 2.51 LYS79:F.N/1
DG28:I.OP1/1 3.09 THR80:F.OG1/1
DT30:I.OP1/1 2.36 THR29:D.OG1/1
DA39:I.OP1/1 3.06 VAL43:G.N/1
DG48:I.OP1/1 2.63 TYR37:H.OH/1
DG48:I.N2/1 3.07 ARG30:H.NH1/1
DG48:I.N3/1 3.46 ARG30:H.NH2/1
DC49:I.OP1/1 2.47 ARG29:G.NH2/1
DA50:I.OP1/1 2.76 THR29:H.O/1
DA50:I.OP1/1 2.5 LYS31:H.N/1
DG58:I.OP1/1 3.09 ARG77:G.N/1
DG70:I.OP1/1 2.68 ARG42:A.N/1
DG70:I.OP1/1 3.04 THR45:A.OG1/1
DG-66:J.O3'/1 2.8 ARG49:A.NE/1
DA-64:J.OP1/1 2.91 LYS56:A.NZ/1
DC-54:J.OP1/1 2.71 SER53:H.N/1
DA-53:J.OP2/1 2.56 TYR39:H.OH/1
DA-53:J.OP2/1 3.33 ILE51:H.N/1
DG-44:J.OP1/1 3.19 ARG32:G.NH1/1
DA-43:J.OP2/1 2.8 ARG17:G.NE/1
DA-43:J.OP2/1 2.95 ARG17:G.NH2/1
DG-42:J.OP2/1 2.96 ARG20:G.NH2/1
DG-35:J.O3'/1 3.27 ARG42:G.NH1/1
DA-34:J.OP1/1 2.73 SER84:H.N/1
DA-34:J.O5'/1 3.22 ARG83:H.NE/1
DG-33:J.OP2/1 2.8 ARG83:H.NH2/1
DT-23:J.OP1/1 3.31 ARG72:E.NH1/1
DT-23:J.OP1/1 3.22 ARG72:E.NH2/1
DT-23:J.OP1/1 2.72 PHE84:E.N/1
DT-23:J.OP2/1 3.04 ARG72:E.NH2/1
DA-13:J.OP1/1 2.64 ARG63:E.NH1/1
DA-13:J.OP1/1 3.05 ARG36:F.NH2/1
DA-13:J.OP2/1 3.42 ARG36:F.NH1/1
DG-5:J.OP1/1 3.09 ARG42:E.NH2/1
DA-3:J.OP1/1 2.56 VAL117:E.N/1
DA-3:J.OP1/1 2.98 THR118:E.N/1
DA-3:J.OP1/1 3.15 THR118:E.OG1/1
DC7:J.OP2/1 3.35 GLY48:B.N/1
DG8:J.OP1/1 2.82 ILE46:B.N/1
DG8:J.O3'/1 3.3 GLY44:A.N/1
DT9:J.OP1/1 2.98 GLY44:A.N/1
DT9:J.OP1/1 2.68 VAL46:A.N/1
DT9:J.OP1/1 3.29 ALA47:A.N/1
DT9:J.O2/1 3.32 ARG40:A.NH1/1
DG10:J.OP1/1 2.95 TYR41:A.N/1
DG10:J.O4'/1 3.03 ARG40:A.NH2/1
DA17:J.OP2/1 2.77 ARG69:A.NH2/1
DG18:J.OP1/1 2.73 LYS64:A.N/1
DG18:J.OP2/1 2.98 LEU65:A.N/1
DA28:J.OP1/1 2.68 LYS79:B.N/1
DA28:J.OP1/1 2.61 THR80:B.OG1/1
DG38:J.OP1/1 2.98 ALA45:C.N/1
DA39:J.OP1/1 3.2 ARG35:C.NE/1
DA39:J.OP1/1 2.93 VAL43:C.N/1
DA39:J.OP2/1 2.24 ARG35:C.NH2/1
DG48:J.OP1/1 2.53 TYR37:D.OH/1
DG48:J.O3'/1 2.98 ARG29:C.NH1/1
DC49:J.OP1/1 2.85 ARG29:C.NH2/1
DC49:J.OP1/1 3.19 SER33:D.N/1
DG50:J.OP1/1 3.26 LYS31:D.N/1
DG50:J.OP2/1 2.8 LYS31:D.NZ/1
DC58:J.OP1/1 2.79 ARG77:C.N/1
DC58:J.OP2/1 3.09 THR76:C.N/1
DG70:J.OP1/1 2.77 ARG42:E.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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