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Nucleic atom dist Protein atom
DG107:B.OP1/1 2.63 THR506:A.OG1/1
DG107:B.OP1/1 3 THR509:A.N/1
DG107:B.OP1/1 2.83 THR509:A.OG1/1
DG107:B.OP2/1 3.06 LYS508:A.N/1
DG107:B.O3'/1 3.05 ARG487:A.NE/1
DG108:B.OP1/1 3.22 ARG487:A.NE/1
DG108:B.OP1/1 3 ARG487:A.NH2/1
DG108:B.OP1/1 2.78 THR514:A.N/1
DG108:B.OP1/1 2.85 THR514:A.OG1/1
DG108:B.OP2/1 2.78 SER513:A.OG/1
DG108:B.N2/1 2.99 LYS540:A.NZ/1
DC109:B.OP1/1 2.97 ARG536:A.NH1/1
DC109:B.OP2/1 2.86 ALA516:A.N/1
DC109:B.O2/1 2.98 LYS540:A.NZ/1
DG110:B.N3/1 3.07 ASN583:A.OD1/1
DC111:B.OP1/1 2.92 VAL586:A.N/1
DC111:B.OP1/1 2.91 ARG587:A.N/1
DC111:B.OP2/1 2.81 ARG587:A.NH1/1
DOC112:B.OP2/1 3.1 ARG660:A.NE/1
DOC112:B.OP2/1 3.21 ARG660:A.NH2/1
DA201:C.O5'/1 2.98 SER515:A.OG/1
DA201:C.N6/1 3.06 GLN680:A.NE2/1
DA203:C.O4'/1 3 ARG746:A.NH1/1
DA203:C.N3/1 3.34 GLY672:A.O/1
DA204:C.OP1/1 3.04 ARG677:A.NH1/1
DA204:C.OP2/1 2.96 SER674:A.N/1
DA204:C.O3'/1 3.29 ARG746:A.NE/1
DG205:C.OP1/1 2.93 ARG746:A.NE/1
DG205:C.N2/1 3.49 GLN754:A.NE2/1
DG206:C.OP1/1 2.92 ARG728:A.NH1/1
DG206:C.O4'/1 3.01 GLN754:A.NE2/1
DC207:C.OP1/1 2.9 ALA570:A.N/1
DG208:C.OP1/1 2.83 SER575:A.OG/1
DG208:C.O4'/1 3.03 ASN580:A.ND2/1
DC209:C.OP1/1 2.77 ASP578:A.N/1
DT212:C.OP1/1 3.07 ASN483:A.ND2/1
DT212:C.OP1/1 3.37 ASN485:A.ND2/1
DG213:C.OP1/1 2.49 SER486:A.OG/1
DG213:C.OP1/1 3.32 GLN489:A.NE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG108:B.N2/1 3.05 213:A/1 3.02 LYS540:A.NZ/1
DG108:B.N3/1 3.1 213:A/1 3.02 LYS540:A.NZ/1
DG110:B.OP1/1 2.81 28:B/1 3.1 ARG536:A.O/1
DG110:B.OP1/1 2.75 211:B/1 2.99 GLU537:A.O/1
DC111:B.OP1/1 2.86 56:B/1 3.27 ARG587:A.N/1
DC111:B.OP1/1 2.86 56:B/1 3.08 THR588:A.N/1
DC111:B.O2/1 2.73 1:B/1 2.82 GLN582:A.O/1
DC111:B.O2/1 2.73 1:B/1 2.83 HIS784:A.NE2/1
DOC112:B.OP1/1 3.06 195:A/1 3.07 ARG595:A.NH1/1
DOC112:B.OP1/1 3.06 195:A/1 3.13 ARG595:A.NH2/1
DOC112:B.OP1/1 3.06 195:A/1 2.77 GLU786:A.OE1/1
DG205:C.OP1/1 2.56 52:C/1 2.88 ALA743:A.O/1
DG205:C.N2/1 3.3 3:A/1 2.61 GLU615:A.OE1/1
DG205:C.N2/1 3.3 3:A/1 2.92 GLN754:A.NE2/1
DG205:C.N3/1 3.36 3:A/1 2.61 GLU615:A.OE1/1
DG205:C.N3/1 3.36 3:A/1 2.92 GLN754:A.NE2/1
DG206:C.N3/1 2.83 25:C/1 2.94 ARG573:A.NH1/1
DC207:C.OP1/1 2.69 110:C/1 2.95 ALA568:A.O/1
DC207:C.O2/1 2.68 2:C/1 3.04 ASN580:A.ND2/1
DG208:C.N3/1 2.82 51:C/1 3.05 ASN580:A.ND2/1
DG208:C.N3/1 2.82 51:C/1 2.99 ASN583:A.OD1/1
DC209:C.OP2/1 2.8 55:A/1 3.02 LYS314:A.NZ/1
DC209:C.OP2/1 2.8 55:A/1 2.53 ASP578:A.OD1/1
DC209:C.O4'/1 3.25 51:C/1 3.05 ASN580:A.ND2/1
DC209:C.O2/1 2.9 19:A/1 2.9 LYS540:A.NZ/1
DC209:C.O2/1 2.9 19:A/1 2.79 THR544:A.OG1/1
DC210:C.O4'/1 3.06 19:A/1 2.9 LYS540:A.NZ/1
DC210:C.O4'/1 3.06 19:A/1 2.79 THR544:A.OG1/1
DG211:C.OP1/1 3.02 34:A/1 2.69 SER543:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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