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Nucleic atom dist Protein atom
DA7:P.OP1/1 3.17 GLY299:B.N/1
DA7:P.OP1/1 3.01 GLY299:B.O/1
DG8:P.OP1/1 3.29 ARG298:B.NH1/1
DA11:P.OP1/1 2.91 GLY187:B.N/1
DA11:P.OP1/1 3.21 THR190:B.N/1
DA12:P.OP1/1 2.64 GLY185:B.N/1
DA12:P.OP1/1 3.31 ILE186:B.N/1
DG13:P.OP1/1 3.2 GLU106:B.OE2/1
DG13:P.OP1/1 2.65 LYS152:B.NZ/1
DC5:T.O5'/1 2.27 ARG332:B.NH2/1
DT6:T.OP1/1 3.06 ARG247:B.NH1/1
DT6:T.OP2/1 2.94 ILE248:B.N/1
DT7:T.OP2/1 2.84 GLY246:B.N/1
DT7:T.OP2/1 2.2 ARG336:B.NH2/1
DT8:T.OP2/1 2.61 LYS243:B.N/1
DT8:T.OP2/1 2.68 SER244:B.N/1
DT11:T.OP1/1 3.06 ALA220:B.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT8:T.OP1/1 2.93 39:T/1 2.98 VAL241:B.O/1
DT11:T.OP1/1 2.61 393:T/1 2.95 ILE217:B.O/1
DT11:T.OP1/1 2.61 393:T/1 2.93 LYS221:B.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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