Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DC4:T.OP1/1 2.75 LYS521:A.NZ/1
DA5:T.OP2/1 3.04 ARG517:A.NE/1
DA5:T.OP2/1 3.14 ARG517:A.NH2/1
DC9:T.OP1/1 2.79 GLU470:A.N/1
DT10:T.OP1/1 3.12 LYS463:A.N/1
DT4:P.OP1/1 2.91 GLY345:A.N/1
DT4:P.OP1/1 2.91 THR348:A.N/1
DT4:P.OP1/1 2.58 THR348:A.OG1/1
DT4:P.OP2/1 3.02 LYS347:A.N/1
DA5:P.OP1/1 2.73 GLY343:A.N/1
DA5:P.OP1/1 3.2 ALA344:A.O/1
DC6:P.OP1/1 3.18 TRP342:A.NE1/1
DC6:P.OP1/1 2.97 ARG488:A.NH2/1
DG1:D.OP1/1 2.79 ARG275:A.NH1/1
DG1:D.OP2/1 2.9 TYR267:A.OH/1
DG1:D.OP2/1 2.44 TYR279:A.OH/1
DC2:D.OP1/1 2.99 GLY306:A.N/1
DC2:D.OP1/1 3.07 MET309:A.N/1
DC3:D.OP1/1 2.91 GLY304:A.N/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DA5:T.OP1/1 2.67 105:A/1 2.65 ARG514:A.NE/1
DA5:T.OP2/1 3.17 137:A/1 2.64 ARG514:A.O/1
DA5:T.N6/1 3.26 154:A/1 2.81 TYR505:A.OH/1
DA8:T.O4'/1 2.95 165:A/1 2.76 LYS472:A.NZ/1
DC9:T.OP1/1 2.89 108:A/1 3.06 GLU470:A.N/1
DC9:T.OP1/1 2.89 108:A/1 2.83 THR471:A.N/1
DC9:T.OP1/1 2.89 108:A/1 3.1 LYS472:A.N/1
DT10:T.O4'/1 3.2 586:A/1 2.88 GLN372:A.NE2/1
DG11:T.OP1/1 2.79 66:A/1 2.99 THR371:A.N/1
DG11:T.OP1/1 2.63 218:T/1 2.85 THR371:A.N/1
DG11:T.OP1/1 2.63 218:T/1 2.86 THR371:A.OG1/1
DG11:T.OP1/1 2.79 66:A/1 2.72 GLN372:A.N/1
DC6:P.O3'/1 2.61 598:A/1 2.79 ASP429:A.OD2/1
DC6:P.O3'/1 2.61 598:A/1 2.52 ASP490:A.OD2/1
DC6:P.O2/1 2.7 41:A/1 2.63 GLU529:A.OE1/1
DG1:D.OP1/1 2.47 82:A/1 2.98 ARG275:A.NH1/1
DG1:D.OP1/1 2.47 82:A/1 3.12 ARG308:A.NH1/1
DC2:D.OP2/1 2.79 230:D/1 2.97 ARG308:A.N/1
DC3:D.OP1/1 2.93 44:A/1 2.71 CYS300:A.O/1
DC3:D.OP1/1 2.93 44:A/1 2.72 ILE302:A.O/1
DC3:D.OP1/1 2.93 44:A/1 2.79 ILE305:A.O/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

text