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Nucleic atom dist Protein atom
DC4:E.OP1/1 2.74 LYS521:C.NZ/1
DA5:E.OP2/1 3.06 ARG517:C.NE/1
DA5:E.OP2/1 2.88 ARG517:C.NH2/1
DC9:E.OP1/1 2.79 GLU470:C.N/1
DG11:E.OP1/1 2.73 THR371:C.OG1/1
DT4:F.OP1/1 2.9 GLY345:C.N/1
DT4:F.OP1/1 2.81 THR348:C.N/1
DT4:F.OP1/1 2.68 THR348:C.OG1/1
DT4:F.OP2/1 2.93 LYS347:C.N/1
DT4:F.O5'/1 2.95 GLY345:C.N/1
DA5:F.OP1/1 2.68 GLY343:C.N/1
DC6:F.OP1/1 3.35 TRP342:C.NE1/1
DC6:F.OP1/1 3.39 ARG488:C.NH2/1
DG1:G.OP1/1 2.84 TYR267:C.OH/1
DG1:G.OP1/1 2.68 TYR279:C.OH/1
DG1:G.OP2/1 2.78 ARG275:C.NH1/1
DC2:G.OP1/1 3.05 GLY306:C.N/1
DC2:G.OP1/1 2.76 MET309:C.N/1
DC3:G.OP1/1 2.81 GLY304:C.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC4:E.O3'/1 2.98 45:C/1 2.87 ARG514:C.O/1
DA5:E.OP1/1 2.88 604:C/1 2.58 ARG514:C.NE/1
DA5:E.OP2/1 2.96 45:C/1 2.87 ARG514:C.O/1
DA5:E.N6/1 3.11 10:C/1 2.77 TYR505:C.OH/1
DG6:E.N2/1 2.97 71:C/1 2.78 GLU529:C.OE1/1
DT7:E.O3'/1 2.68 57:E/1 3.22 HIS530:C.NE2/1
DA8:E.OP1/1 2.96 57:E/1 3.22 HIS530:C.NE2/1
DC9:E.OP1/1 2.8 412:E/1 3.3 GLU470:C.N/1
DC9:E.OP1/1 2.8 412:E/1 3.39 THR471:C.N/1
DC9:E.OP1/1 2.8 412:E/1 3.43 LYS472:C.N/1
DC6:F.O3'/1 2.27 81:F/1 3.13 ASP429:C.OD1/1
DC6:F.O3'/1 2.27 81:F/1 2.5 ASP490:C.OD2/1
DC6:F.O2/1 3.07 58:C/1 2.72 GLU529:C.OE1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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