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Nucleic atom dist Protein atom
DA-55:I.OP2/1 3.21 SER53:D.OG/1
DA-44:I.OP2/1 2.82 ARG32:C.NH1/1
DG-43:I.OP1/1 2.89 ARG17:C.N/1
DG-43:I.OP2/1 3.19 ARG17:C.NE/1
DT-42:I.OP1/1 2.88 ARG20:C.NH1/1
DG-35:I.O4'/1 3.15 ARG42:C.NH2/1
DG-34:I.OP1/1 3.18 SER84:D.N/1
DG-34:I.OP1/1 3.11 THR85:D.N/1
DG-34:I.OP1/1 2.69 THR85:D.OG1/1
DG-34:I.OP2/1 3.33 SER84:D.N/1
DC-27:I.OP1/1 2.91 ARG26:H.NH2/1
DC-24:I.OP2/1 3.08 SER86:A.N/1
DA-23:I.OP1/1 2.71 ARG72:A.NH1/1
DA-23:I.OP1/1 3.08 PHE84:A.N/1
DA-23:I.OP2/1 3.14 ARG72:A.NH2/1
DC-14:I.OP1/1 3.45 ARG36:B.NH2/1
DT-4:I.OP1/1 2.89 VAL117:A.N/1
DT-4:I.OP1/1 2.56 THR118:A.OG1/1
DC6:I.OP2/1 3.09 GLY48:F.N/1
DT7:I.OP1/1 2.7 ILE46:F.N/1
DT7:I.O3'/1 3.34 GLY44:E.N/1
DG8:I.OP1/1 2.81 GLY44:E.N/1
DG8:I.OP1/1 2.94 VAL46:E.N/1
DG8:I.OP1/1 3.12 ALA47:E.N/1
DG8:I.N3/1 2.81 ARG40:E.NH2/1
DA9:I.OP1/1 2.84 TYR41:E.N/1
DA9:I.O4'/1 3.34 ARG40:E.NH1/1
DT17:I.OP1/1 3.18 ARG69:E.NH1/1
DT17:I.OP1/1 2.91 ARG69:E.NH2/1
DT17:I.OP2/1 3.25 ARG69:E.NH1/1
DT18:I.OP1/1 2.84 LYS64:E.N/1
DT18:I.OP2/1 3.05 LEU65:E.N/1
DG27:I.OP1/1 2.66 LYS79:F.NZ/1
DC28:I.OP1/1 2.78 LYS79:F.N/1
DC28:I.OP1/1 2.7 THR80:F.N/1
DC28:I.OP1/1 2.56 THR80:F.OG1/1
DG30:I.OP1/1 2.57 THR29:D.OG1/1
DT31:I.OP1/1 2.42 ARG26:D.O/1
DA38:I.OP1/1 2.6 ALA45:G.N/1
DT39:I.OP1/1 2.81 ARG35:G.NH1/1
DT39:I.OP1/1 3.4 VAL43:G.N/1
DT39:I.OP2/1 2.65 ARG35:G.NH2/1
DT45:I.O2/1 2.43 LYS13:G.NZ/1
DT46:I.O4'/1 2.61 LYS13:G.NZ/1
DG49:I.OP1/1 3.12 ARG29:G.NH1/1
DG49:I.OP1/1 2.78 ARG29:G.NH2/1
DG49:I.OP1/1 3.27 SER33:H.N/1
DG49:I.O4'/1 2.92 ARG30:H.NH1/1
DT50:I.OP1/1 3 LYS31:H.N/1
DC59:I.OP1/1 3.17 THR76:G.N/1
DC59:I.OP1/1 2.91 ARG77:G.N/1
DA60:I.OP2/1 3.27 LYS75:G.NZ/1
DG71:I.OP1/1 2.8 ARG42:A.N/1
DG71:I.OP1/1 3.08 THR45:A.OG1/1
DA72:I.OP1/1 2.7 ARG42:A.NH1/1
DA-55:J.OP2/1 3 SER53:H.N/1
DA-44:J.OP2/1 2.63 ARG32:G.NE/1
DG-43:J.OP1/1 2.94 ARG17:G.N/1
DG-43:J.OP2/1 2.97 ARG17:G.NE/1
DT-42:J.OP1/1 3.23 ARG20:G.NH2/1
DG-34:J.OP1/1 3.14 SER84:H.N/1
DG-34:J.OP1/1 3.22 THR85:H.N/1
DG-34:J.OP1/1 2.5 THR85:H.OG1/1
DA-33:J.OP2/1 3.05 ARG83:H.NH2/1
DG-28:J.O4'/1 2.85 ARG26:D.NH1/1
DT-26:J.OP1/1 3.22 LYS25:D.NZ/1
DC-24:J.OP2/1 3.11 SER86:E.N/1
DA-23:J.OP1/1 3.07 ARG72:E.NH1/1
DA-23:J.OP1/1 2.8 ARG72:E.NH2/1
DA-23:J.OP1/1 3.06 PHE84:E.N/1
DT-12:J.OP1/1 3 ARG63:E.NE/1
DT-12:J.OP1/1 2.99 ARG36:F.NH2/1
DT-12:J.OP2/1 3 ARG36:F.NH1/1
DT-4:J.OP1/1 3.24 ARG42:E.NE/1
DG-2:J.OP1/1 2.88 VAL117:E.N/1
DG-2:J.OP1/1 2.43 THR118:E.OG1/1
DG8:J.OP2/1 3.07 GLY48:B.N/1
DG8:J.O4'/1 3.05 ARG45:B.NH2/1
DA9:J.OP1/1 2.55 ILE46:B.N/1
DA9:J.OP2/1 2.9 ARG35:B.NH2/1
DA10:J.OP1/1 2.75 GLY44:A.N/1
DA10:J.OP1/1 3.05 VAL46:A.N/1
DA10:J.OP1/1 3.24 ALA47:A.N/1
DA10:J.N3/1 3.05 ARG40:A.NH2/1
DC11:J.OP1/1 2.89 TYR41:A.N/1
DT18:J.OP1/1 2.9 ARG69:A.NH2/1
DT18:J.OP2/1 2.81 ARG69:A.NH1/1
DT19:J.OP1/1 3.25 LYS64:A.N/1
DT19:J.OP2/1 2.95 LEU65:A.N/1
DC28:J.OP1/1 2.96 LYS79:B.N/1
DC28:J.OP1/1 2.67 THR80:B.OG1/1
DA38:J.OP1/1 3.21 ALA45:C.N/1
DT39:J.OP1/1 2.92 ARG35:C.NH1/1
DT39:J.OP1/1 3.31 VAL43:C.N/1
DT39:J.OP2/1 3.17 ARG35:C.NH1/1
DT39:J.OP2/1 3.18 ARG35:C.NH2/1
DG49:J.OP1/1 2.7 ARG29:C.NH2/1
DG49:J.OP1/1 3.15 SER33:D.N/1
DG49:J.OP1/1 3.07 SER33:D.O/1
DT50:J.OP1/1 2.75 LYS31:D.N/1
DG58:J.O3'/1 3.45 ARG77:C.NH1/1
DC59:J.OP1/1 3.15 THR76:C.N/1
DC59:J.OP1/1 2.98 ARG77:C.N/1
DG71:J.OP1/1 2.83 ARG42:E.N/1
DG71:J.OP1/1 2.97 THR45:E.OG1/1
DA72:J.O3'/1 2.81 LYS37:E.NZ/1
DT73:J.O5'/1 2.67 LYS37:E.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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