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Nucleic atom dist Protein atom
DT1:T.N3/1 2.82 ASN786:A.OD1/1
DT1:T.O4/1 2.95 ASN786:A.ND2/1
DC2:T.OP1/1 2.79 ARG260:A.NH2/1
DC2:T.OP2/1 3.06 ARG260:A.NE/1
DC2:T.N4/1 2.88 GLU219:A.OE2/1
DG4:T.OP1/1 2.58 SER360:A.OG/1
DG4:T.OP1/1 3.06 ILE362:A.N/1
DG4:T.O3'/1 2.98 ASN572:A.ND2/1
DG4:T.N2/1 3.18 ASN564:A.O/1
DG5:T.OP1/1 2.9 ASN572:A.ND2/1
DA7:T.OP1/1 2.87 GLY393:A.N/1
DA8:T.OP1/1 2.77 LYS705:A.NZ/1
DG12:T.OP1/1 2.9 LYS874:A.NZ/1
DT13:T.OP1/1 2.79 LYS844:A.NZ/1
DC14:T.OP1/1 2.86 LYS800:A.N/1
DG110:P.OP1/1 2.68 TYR791:A.OH/1
DC111:P.OP1/1 3.14 SER784:A.O/1
DC111:P.OP1/1 3.08 ASN786:A.N/1
DC111:P.OP1/1 2.76 HIS804:A.NE2/1
DC111:P.OP2/1 2.86 ASN786:A.ND2/1
DT112:P.OP1/1 2.93 SER784:A.N/1
DT112:P.OP2/1 2.69 SER784:A.OG/1
DT113:P.OP1/1 2.78 SER735:A.N/1
DT113:P.OP1/1 2.9 SER735:A.OG/1
DT113:P.OP2/1 2.76 ASN284:A.ND2/1
DA114:P.OP1/1 2.81 GLY729:A.N/1
DA114:P.N3/1 3.07 LYS706:A.NZ/1
DOC115:P.OP1/1 2.71 TYR708:A.OH/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC2:T.OP2/1 2.68 917:T/1 2.68 ILE253:A.O/1
DC2:T.OP2/1 2.68 917:T/1 2.71 ASN255:A.ND2/1
DA3:T.N6/1 2.63 1382:A/1 2.74 GLU219:A.OE2/1
DA3:T.N6/1 2.63 1382:A/1 2.59 ASP275:A.OD2/1
DG4:T.OP2/1 2.52 627:T/1 3 ASN572:A.ND2/1
DT6:T.OP1/1 2.6 381:T/1 3.03 GLN389:A.O/1
DT6:T.OP1/1 2.68 35:T/1 3.2 TYR391:A.N/1
DT6:T.O2/1 2.63 29:T/1 3.1 ALA394:A.N/1
DA7:T.O4'/1 2.85 19:T/1 2.88 LYS706:A.NZ/1
DA8:T.OP1/1 2.66 141:T/1 2.85 VAL396:A.N/1
DG9:T.OP1/1 2.67 1298:A/1 2.56 GLU398:A.OE1/1
DG9:T.OP1/1 2.59 20:T/1 2.7 GLU398:A.OE2/1
DG9:T.OP1/1 2.59 20:T/1 3.01 LYS705:A.N/1
DC10:T.OP1/1 2.82 1042:A/1 2.63 THR703:A.OG1/1
DA11:T.OP1/1 2.76 1311:A/1 2.6 LYS874:A.O/1
DT13:T.OP1/1 2.71 975:A/1 2.69 CYS801:A.O/1
DT13:T.OP1/1 2.71 975:A/1 2.9 ARG806:A.NE/1
DC14:T.OP1/1 2.61 660:T/1 2.76 GLY798:A.O/1
DC14:T.OP1/1 2.61 660:T/1 3.48 CYS801:A.N/1
DG110:P.OP1/1 2.94 1318:A/1 2.76 ASN787:A.ND2/1
DT112:P.OP1/1 2.68 227:P/1 2.69 SER735:A.OG/1
DT112:P.OP1/1 2.68 227:P/1 2.74 LYS829:A.NZ/1
DT112:P.OP2/1 2.68 362:P/1 3.17 ASN284:A.ND2/1
DT112:P.O2/1 2.81 1456:A/1 2.75 LYS734:A.NZ/1
DA114:P.OP1/1 2.6 215:P/1 3.11 GLN733:A.NE2/1
DA114:P.O3'/1 3.11 966:A/1 2.52 TYR619:A.OH/1
DA114:P.O3'/1 3.11 966:A/1 2.71 ASP621:A.OD2/1
DOC115:P.OP1/1 2.65 966:A/1 2.52 TYR619:A.OH/1
DOC115:P.OP1/1 2.65 966:A/1 2.71 ASP621:A.OD2/1
DOC115:P.OP1/1 2.94 1080:A/1 2.6 SER624:A.OG/1
DOC115:P.OP1/1 2.94 1080:A/1 2.96 TYR626:A.OH/1
DOC115:P.OP2/1 2.58 199:P/1 3.06 LYS726:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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