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Nucleic atom dist Protein atom
DT6:E.O2/1 2.98 ARG7:G.NH2/1
DA7:E.OP1/1 2.53 TYR63:G.OH/1
DG10:E.OP1/1 2.98 ARG44:D.NH1/1
DG2:F.N2/1 3.07 ARG7:D.NH1/1
DG4:F.OP1/1 2.78 ARG7:D.N/1
DA5:F.OP2/1 3.33 LYS6:D.NZ/1
DC9:F.O4'/1 3.01 ARG7:G.NH2/1
DG10:F.OP1/1 3.45 ARG7:G.N/1
DC11:F.O3'/1 3.31 ARG20:G.NH1/1
DG4:H.OP1/1 2.99 LYS24:G.NZ/1
DG10:I.N2/1 2.98 VAL32:G.O/1
DA5:K.OP1/1 3.04 ARG44:P.NH1/1
DT6:K.OP1/1 2.77 TRP43:P.NE1/1
DG10:K.OP1/1 2.8 LYS37:J.NZ/1
DC11:K.OP1/1 3.28 ARG44:J.NH1/1
DC3:L.OP1/1 3.19 ARG7:J.N/1
DC9:L.OP1/1 3.16 ARG7:P.N/1
DA5:N.OP1/1 3.2 ARG44:M.NH1/1
DT8:N.OP1/1 2.95 ARG7:M.NH2/1
DG10:N.OP1/1 3.09 ARG7:A.N/1
DC3:O.O5'/1 3.26 LYS37:A.NZ/1
DG4:O.OP1/1 3.14 ARG44:A.NH1/1
DA5:O.OP1/1 2.84 TRP43:A.NE1/1
DC9:O.OP1/1 2.75 ARG7:M.N/1
DG10:O.OP1/1 2.17 ARG25:D.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG10:E.N3/1 3.32 75:D/1 2.66 SER10:D.OG/1
DA5:K.N3/1 2.67 75:K/1 2.95 SER10:P.OG/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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