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Nucleic atom dist Protein atom
DC4:C.OP1/1 2.47 LYS521:A.NZ/1
DT5:C.OP1/1 2.9 ARG514:A.NH2/1
DT5:C.OP2/1 2.74 ARG514:A.NE/1
DT5:C.O2/1 2.88 ARG517:A.NH1/1
DA8:C.OP1/1 2.94 HIS530:A.NE2/1
DT10:C.OP1/1 3.07 LYS463:A.N/1
DG1:D.OP1/1 3.06 ARG275:A.NH1/1
DG1:D.OP1/1 2.84 ARG308:A.NH1/1
DG1:D.OP2/1 2.57 TYR267:A.OH/1
DG1:D.OP2/1 2.86 TYR279:A.OH/1
DC2:D.OP1/1 2.85 GLY306:A.N/1
DC2:D.OP1/1 2.7 MET309:A.N/1
DC3:D.OP1/1 2.86 GLY304:A.N/1
DT4:H.OP1/1 2.67 GLY345:A.N/1
DT4:H.OP1/1 2.91 THR348:A.N/1
DT4:H.OP1/1 2.78 THR348:A.OG1/1
DT4:H.OP2/1 3.11 LYS347:A.N/1
DA5:H.OP1/1 2.82 GLY343:A.N/1
DC6:H.OP1/1 3.11 TRP342:A.NE1/1
DC6:H.OP1/1 2.94 ARG488:A.NH2/1
DC6:H.O3'/1 2.93 ASP429:A.OD2/1
DC6:H.O3'/1 2.87 ASP490:A.OD2/1
DC6:H.O2/1 2.91 TYR505:A.OH/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG11:C.OP1/1 2.93 102:A/1 2.85 THR371:A.N/1
DC3:D.OP1/1 3 7:A/1 2.45 CYS300:A.O/1
DC3:D.OP1/1 3 7:A/1 3.11 ILE302:A.O/1
DC3:D.OP1/1 3 7:A/1 2.44 ILE305:A.O/1
DC6:H.OP1/1 2.42 12:H/1 2.92 ASP427:A.OD1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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