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Nucleic atom dist Protein atom
DA6:P.OP2/1 3.11 THR301:B.OG1/1
DA7:P.OP2/1 2.85 GLY299:B.N/1
DG8:P.OP1/1 3.35 ARG298:B.NH1/1
DG8:P.OP2/1 2.94 SER297:B.N/1
DC11:P.OP1/1 2.81 GLY187:B.N/1
DC11:P.OP1/1 2.86 THR190:B.N/1
DC11:P.OP1/1 2.66 THR190:B.OG1/1
DC11:P.OP2/1 3.25 ILE189:B.N/1
DT12:P.OP1/1 2.58 GLY185:B.N/1
DA3:T.OP1/1 3.22 GLY41:B.N/1
DT4:T.OP1/1 3.12 ARG331:B.NH2/1
DG5:T.OP2/1 2.46 THR250:B.OG1/1
DG5:T.OP2/1 2.88 ARG332:B.NE/1
DG5:T.OP2/1 2.84 ARG332:B.NH2/1
DG5:T.O5'/1 3.15 ARG332:B.NH2/1
DA6:T.OP1/1 2.84 LYS275:B.NZ/1
DA6:T.OP2/1 2.93 ILE248:B.N/1
DG7:T.OP2/1 3 GLY246:B.N/1
DG7:T.OP2/1 2.46 ARG336:B.NH2/1
DG7:T.O5'/1 2.64 ARG336:B.NH2/1
DT8:T.OP1/1 2.66 LYS243:B.N/1
DT8:T.OP2/1 3 SER244:B.OG/1
DC9:T.OP2/1 3.14 LYS243:B.NZ/1
DT11:T.OP1/1 2.79 ALA220:B.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA3:T.OP1/1 2.87 393:B/1 3.1 VAL62:B.N/1
DC10:T.O3'/1 3.17 54:T/1 3 LYS221:B.N/1
DT11:T.OP1/1 2.61 54:T/1 2.94 ILE217:B.O/1
DT11:T.OP1/1 2.61 54:T/1 3 LYS221:B.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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