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Nucleic atom dist Protein atom
DG105:E.OP2/1 2.54 TYR475:B.OH/1
DG105:E.O4'/1 3.33 LYS436:B.NZ/1
DT106:E.OP1/1 3.12 ARG468:B.NE/1
DC107:E.OP2/1 3.26 ASP469:B.N/1
DC107:E.OP2/1 2.7 THR472:B.OG1/1
DC108:E.N4/1 2.94 THR471:B.OG1/1
DT202:F.OP1/1 2.58 SER458:B.OG/1
DT203:F.OP2/1 2.8 LEU459:B.N/1
DG204:F.N7/1 2.78 HIS470:B.NE2/1
DC212:F.OP1/1 2.96 LYS436:B.N/1
DG213:F.OP1/1 2.85 ARG438:B.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT104:E.OP1/1 2.97 52:B/1 2.82 LYS479:B.NZ/1
DG105:E.N3/1 2.74 140:E/1 2.87 LYS436:B.NZ/1
DT106:E.O4'/1 3.14 140:E/1 2.87 LYS436:B.NZ/1
DC107:E.N4/1 2.93 68:E/1 3.12 THR471:B.O/1
DA109:E.N6/1 3.09 100:B/1 2.95 ASP469:B.OD2/1
DT205:F.OP2/1 2.71 186:B/1 2.67 ARG478:B.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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