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Nucleic atom dist Protein atom
DT373:B.O2/1 3.24 TYR12:A.OH/1
DA375:B.OP1/1 2.49 GLY246:A.N/1
DA376:B.OP1/1 3.1 ARG242:A.NH1/1
DA376:B.OP2/1 2.9 LYS243:A.N/1
DC379:B.OP1/1 2.73 ALA220:A.N/1
DA353:C.OP2/1 2.79 THR301:A.N/1
DA353:C.OP2/1 2.74 THR301:A.OG1/1
DG354:C.OP2/1 2.9 GLY299:A.N/1
DG355:C.OP1/1 3.34 ARG298:A.NH1/1
DT358:C.OP1/1 2.72 GLY187:A.N/1
DT358:C.OP1/1 2.59 GLY187:A.O/1
DT358:C.OP1/1 3.04 THR190:A.N/1
DT358:C.OP1/1 2.61 THR190:A.OG1/1
DC359:C.OP1/1 2.87 GLY185:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT373:B.O5'/1 2.25 2012:B/1 3.17 ARG332:A.NH2/1
DA375:B.OP2/1 2.09 2009:B/1 2.6 SER244:A.OG/1
DA375:B.O5'/1 2.81 2009:B/1 2.6 SER244:A.OG/1
DC359:C.OP1/1 2.85 2025:A/1 2.43 VAL183:A.O/1
DC359:C.OP1/1 2.85 2025:A/1 3.02 GLY185:A.N/1
DC359:C.OP1/1 2.85 2025:A/1 3.08 ILE186:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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