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Nucleic atom dist Protein atom
DT372:B.O2/1 2.55 ARG248:A.NH2/1
DT373:B.OP1/1 2.78 THR251:A.N/1
DT373:B.OP2/1 2.84 THR251:A.OG1/1
DA375:B.OP2/1 3.07 GLY247:A.N/1
DA375:B.OP2/1 3.14 GLY247:A.O/1
DA376:B.OP1/1 3.1 ARG243:A.NH1/1
DA376:B.OP1/1 2.68 LYS244:A.N/1
DA376:B.OP2/1 2.71 SER245:A.OG/1
DT377:B.OP2/1 3.27 LYS244:A.NZ/1
DC379:B.OP1/1 2.96 ALA221:A.N/1
DA353:C.OP2/1 2.67 THR302:A.OG1/1
DG354:C.OP2/1 2.94 GLY300:A.N/1
DT357:C.OP1/1 3.31 LYS194:A.NZ/1
DT358:C.OP1/1 2.74 GLY188:A.N/1
DT358:C.OP1/1 2.84 THR191:A.N/1
DT358:C.OP2/1 3.41 ILE190:A.N/1
DC359:C.OP1/1 2.57 GLY186:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT377:B.OP1/1 2.37 2061:B/1 2.39 ARG239:A.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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