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Nucleic atom dist Protein atom
DG6:B.OP1/1 2.89 GLY394:A.N/1
DG6:B.OP2/1 2.24 TYR416:A.OH/1
DG6:B.O6/1 2.4 ASP418:A.OD1/1
DG6:B.O6/1 3.29 THR429:A.N/1
DG8:B.OP1/1 2.73 ARG379:A.N/1
DG8:B.OP2/1 2.45 TYR486:A.OH/1
DT9:B.OP1/1 2.38 TYR378:A.OH/1
DA10:B.OP1/1 3.04 ARG389:X.NH1/1
DT11:B.OP1/1 3.2 TYR397:X.OH/1
5CM5:C.OP1/1 2.78 GLY394:X.N/1
5CM5:C.OP1/1 2.76 GLN431:X.OE1/1
5CM5:C.OP2/1 2.3 TYR416:X.OH/1
DT7:C.OP1/1 2.92 ARG379:X.N/1
DT7:C.OP2/1 2.94 TYR486:X.OH/1
DC8:C.OP1/1 2.76 TYR378:X.OH/1
DG10:C.OP1/1 3.15 TYR397:A.OH/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG6:B.O3'/1 2.44 12:B/1 2.75 SER413:A.OG/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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