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Nucleic atom dist Protein atom
DG841:T.OP2/1 2.73 SER307:B.OG/1
DG842:T.OP2/1 2.9 GLU305:B.N/1
DG843:T.OP1/1 2.88 ARG331:B.NH1/1
DG843:T.OP2/1 2.8 SER303:B.N/1
DG843:T.OP2/1 2.93 SER303:B.OG/1
DT844:T.OP1/1 2.71 GLN300:B.N/1
DT844:T.OP1/1 3.09 GLN300:B.NE2/1
DT844:T.OP2/1 2.74 SER301:B.OG/1
DC845:T.OP1/1 2.92 GLN300:B.OE1/1
DC845:T.OP2/1 2.77 GLN300:B.NE2/1
DA867:P.OP2/1 2.7 GLN361:B.N/1
DG868:P.OP2/1 2.91 SER359:B.N/1
DC871:P.OP1/1 3.06 GLY243:B.N/1
DC871:P.OP1/1 3.06 THR246:B.N/1
DC871:P.OP1/1 2.78 THR246:B.OG1/1
DC871:P.OP2/1 3.28 LYS245:B.N/1
DC872:P.OP1/1 2.9 GLY241:B.N/1
DC873:P.OP1/1 2.77 LYS207:B.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG841:T.OP1/1 3 520:B/1 2.87 GLU305:B.O/1
DG841:T.OP2/1 2.89 678:B/1 2.45 GLU305:B.OE2/1
DG841:T.N3/1 2.92 470:B/1 2.69 TYR39:B.OH/1
DG841:T.N3/1 2.92 470:B/1 3.22 GLN59:B.NE2/1
DG842:T.OP1/1 2.87 694:B/1 2.84 LEU99:B.N/1
DG842:T.OP2/1 2.87 580:B/1 2.64 GLU97:B.O/1
DG842:T.N7/1 2.79 85:T/1 3.19 GLU305:B.OE1/1
DG842:T.N7/1 2.79 85:T/1 3.17 ARG357:B.NH1/1
DG842:T.N7/1 2.79 85:T/1 3.26 ARG357:B.NH2/1
DG843:T.OP1/1 2.4 253:T/1 2.73 SER301:B.O/1
DG843:T.OP2/1 2.85 632:B/1 2.54 SER301:B.OG/1
DA867:P.OP1/1 2.61 335:P/1 3.04 GLN361:B.O/1
DA867:P.OP2/1 2.76 97:P/1 3.15 ARG343:B.NH1/1
DA867:P.OP2/1 2.76 97:P/1 3.16 SER359:B.OG/1
DA867:P.OP2/1 2.76 97:P/1 3.15 GLN361:B.NE2/1
DG869:P.OP2/1 2.83 3:P/1 3.03 ARG357:B.O/1
DC872:P.OP2/1 3.08 553:B/1 2.67 LYS237:B.NZ/1
DC873:P.O2/1 2.7 136:P/1 2.7 PHE125:B.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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