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Nucleic atom dist Protein atom
DA5:B.OP1/1 3.37 ARG206:A.NH2/1
DA5:B.OP2/1 3.39 ARG206:A.NH1/1
DC6:B.OP1/1 2.92 LYS202:A.NZ/1
DC6:B.N4/1 3.14 ARG200:A.O/1
DG7:B.OP2/1 2.88 ARG167:A.NE/1
DG8:B.N7/1 3.26 ARG213:A.NH2/1
DG8:B.O6/1 3.09 ARG213:A.NH1/1
DC6:C.N4/1 2.89 ILE199:A.O/1
DG7:C.N7/1 2.66 ARG200:A.NH1/1
DG7:C.O6/1 3.23 ARG200:A.NH1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC6:B.OP2/1 2.62 13:B/1 2.73 GLN201:A.OE1/1
DC6:B.OP2/1 2.62 13:B/1 3.04 LYS202:A.N/1
DC6:B.OP2/1 2.63 14:B/1 2.65 GLN207:A.OE1/1
DC6:B.OP2/1 2.62 13:B/1 2.86 GLN207:A.NE2/1
DG7:B.N7/1 2.79 4:A/1 2.62 GLN201:A.OE1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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