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Nucleic atom dist Protein atom
DA1003:E.O5'/1 2.77 LYS106:D.NZ/1
DG1004:E.N7/1 3.01 ARG81:D.NH1/1
DG1004:E.O6/1 2.97 ARG81:D.NH2/1
DT1007:E.OP1/1 2.93 ARG38:A.NE/1
DT1007:E.OP1/1 2.54 ARG38:A.NH2/1
DT1007:E.OP2/1 3.02 ALA85:A.N/1
DA1008:E.OP2/1 2.84 GLN83:A.N/1
DA1008:E.N7/1 2.97 GLN83:A.OE1/1
DA1008:E.N7/1 3.02 LYS88:A.NZ/1
DA1008:E.N6/1 2.88 GLN83:A.OE1/1
DG1009:E.OP2/1 3.06 LEU78:A.N/1
DG1009:E.O6/1 2.97 LYS88:A.NZ/1
DA2003:F.OP1/1 3.08 LYS106:A.NZ/1
DA2003:F.OP2/1 3.03 LYS106:A.NZ/1
DG2004:F.N7/1 3.41 ARG81:A.NH1/1
DG2004:F.O6/1 3.22 ARG81:A.NH2/1
DT2007:F.OP2/1 3.26 ALA85:D.N/1
DA2008:F.OP2/1 3.07 GLN83:D.N/1
DA2008:F.N6/1 2.91 GLN83:D.OE1/1
DG2009:F.OP2/1 3.2 LEU78:D.N/1
DG2009:F.N7/1 3.48 LYS88:D.NZ/1
DG2009:F.O6/1 2.93 LYS88:D.NZ/1
DT2012:F.OP1/1 2.56 LYS45:A.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT1007:E.OP1/1 2.55 4:E/1 2.92 SER42:A.OG/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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