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Nucleic atom dist Protein atom
DC4:B.OP2/1 2.85 LYS198:A.N/1
DT5:B.OP1/1 2.73 HIS293:A.NE2/1
DA6:B.OP1/1 3.1 LEU254:A.N/1
DA6:B.N7/1 3.06 GLN202:A.OE1/1
DA6:B.N6/1 3.2 GLN202:A.OE1/1
DA6:B.N6/1 2.98 GLN202:A.NE2/1
DA7:B.OP2/1 2.83 THR252:A.OG1/1
DA7:B.N7/1 3.11 GLN204:A.NE2/1
DA7:B.N6/1 3.36 GLN204:A.OE1/1
DG10:B.N7/1 2.76 ARG232:A.NH2/1
DG10:B.O6/1 2.64 ARG232:A.NH2/1
DT16:B.OP2/1 2.92 HIS57:A.N/1
DT16:B.O3'/1 2.62 GLU29:A.OE1/1
DA17:C.OP2/1 2.91 ALA28:A.O/1
DA17:C.OP2/1 3.08 GLU29:A.OE2/1
DA17:C.OP2/1 3.03 GLU184:A.OE1/1
DG18:C.OP2/1 2.83 SER31:A.OG/1
DG18:C.OP2/1 3.01 LYS108:A.NZ/1
DG18:C.O6/1 2.35 ARG83:A.NH2/1
DG19:C.OP1/1 2.83 LEU145:A.N/1
DG19:C.OP2/1 2.95 ASN144:A.ND2/1
DG19:C.N7/1 2.72 ARG53:A.NH2/1
DG19:C.O6/1 3.12 ARG53:A.NH1/1
DG19:C.O6/1 3 ARG83:A.NH1/1
DA20:C.OP2/1 2.82 LYS140:A.NZ/1
DA20:C.N6/1 3.24 ARG51:A.NH1/1
DG21:C.OP2/1 2.9 SER37:A.OG/1
DG21:C.N7/1 3.28 ARG51:A.NH2/1
DG21:C.O6/1 2.77 ARG51:A.NH2/1
DA3:D.OP2/1 3.35 ASN43:A.N/1
DA4:D.OP1/1 2.98 LYS125:A.NZ/1
DA4:D.OP2/1 3.04 HIS127:A.NE2/1
DA4:D.N7/1 3.07 ARG42:A.NH1/1
DT5:D.OP1/1 3.28 LEU89:A.N/1
DG6:D.N7/1 2.89 ARG49:A.NH2/1
DG6:D.O6/1 2.54 ARG49:A.NH1/1
DC7:D.N4/1 3.09 GLU87:A.OE1/1
DC9:D.N4/1 3.04 ARG83:A.NH1/1
DC15:D.OP1/1 2.61 GLU184:A.OE2/1
DC15:D.OP2/1 2.78 ASP212:A.N/1
DG16:E.N7/1 2.86 ARG234:A.NH2/1
DG16:E.O6/1 2.43 ARG234:A.NH1/1
DA17:E.OP2/1 2.46 SER186:A.OG/1
DA17:E.N7/1 3.09 GLN208:A.NE2/1
DA17:E.N6/1 3.4 ARG234:A.NH1/1
DC18:E.OP1/1 2.72 ARG311:A.N/1
DC18:E.OP2/1 2.98 ASN310:A.ND2/1
DC18:E.N4/1 2.89 TYR188:A.OH/1
DG19:E.OP2/1 2.76 LYS306:A.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT5:B.OP2/1 2.67 19:B/1 2.86 VAL203:A.N/1
DT16:B.OP1/1 2.95 320:A/1 2.78 ASP60:A.OD2/1
DG19:C.OP1/1 2.73 16:C/1 3.35 LYS140:A.NZ/1
DG19:C.OP1/1 2.59 13:C/1 2.89 GLY146:A.O/1
DA20:C.OP1/1 2.49 14:C/1 3 SER148:A.OG/1
DA20:C.OP2/1 2.58 9:C/1 2.95 THR35:A.OG1/1
DA2:D.OP2/1 2.91 328:A/1 2.79 LYS41:A.O/1
DA3:D.OP2/1 2.71 19:D/1 3.22 ASN43:A.N/1
DA3:D.OP2/1 2.71 19:D/1 3.23 THR44:A.N/1
DA4:D.OP1/1 2.66 23:D/1 2.86 ILE122:A.O/1
DC15:D.OP1/1 2.89 322:A/1 2.99 ASP27:A.O/1
DC15:D.OP1/1 2.89 322:A/1 2.6 ALA28:A.O/1
DC15:D.OP1/1 2.89 322:A/1 2.88 GLN211:A.OE1/1
DG16:E.OP2/1 2.77 336:A/1 2.59 ALA182:A.O/1
DG16:E.OP2/1 2.77 336:A/1 2.69 GLY183:A.O/1
DG16:E.OP2/1 2.77 336:A/1 2.49 LYS274:A.NZ/1
DA17:E.OP2/1 2.72 30:E/1 2.76 PHE187:A.N/1
DA17:E.OP2/1 2.72 30:E/1 2.95 ASN310:A.OD1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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