Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DG12:E.OP1/1 2.81 ARG87:A.NE/1
DA13:E.OP1/1 2.74 LYS38:A.NZ/1
DA14:E.OP1/1 3.24 ARG28:A.NH1/1
DA14:E.OP2/1 2.56 HIS74:A.NE2/1
DT15:E.OP1/1 2.88 HIS76:A.ND1/1
DT15:E.OP1/1 2.99 ARG117:B.NH2/1
DT15:E.OP2/1 3.38 GLY77:A.N/1
DT15:E.OP2/1 3.23 ARG117:B.NH1/1
DT15:E.O3'/1 2.81 GLU433:C.OE1/1
DA1:F.O5'/1 3.31 ARG117:A.NH1/1
DT6:F.OP1/1 2.73 ASN473:C.ND2/1
DT7:F.OP1/1 2.98 ASN461:C.N/1
DT7:F.O3'/1 3.17 HIS513:C.NE2/1
DC8:F.OP1/1 3.05 HIS513:C.NE2/1
DC8:F.OP2/1 2.62 ASN461:C.ND2/1
DC8:F.OP2/1 2.9 LYS464:C.NZ/1
DA9:F.OP1/1 2.74 GLY173:A.N/1
DA9:F.OP2/1 2.96 ARG629:C.NH1/1
DT10:F.OP1/1 2.79 ARG630:C.NH2/1
DG12:G.OP1/1 2.81 ARG87:B.NE/1
DC13:G.OP1/1 2.36 LYS38:B.NZ/1
DA14:G.OP2/1 2.64 HIS74:B.NE2/1
DT15:G.OP1/1 3.09 ARG117:A.NH2/1
DT15:G.OP1/1 3.04 HIS76:B.ND1/1
DT15:G.OP2/1 2.87 ARG117:A.NH1/1
DT15:G.OP2/1 3.25 GLY77:B.N/1
DT15:G.O3'/1 2.87 GLU433:D.OE1/1
DT15:G.O2/1 2.98 LYS458:D.N/1
DG7:H.OP1/1 2.74 ASN461:D.N/1
DG7:H.O3'/1 3.1 HIS513:D.NE2/1
DC8:H.OP1/1 3.04 HIS513:D.NE2/1
DC8:H.OP2/1 2.5 ASN461:D.ND2/1
DC8:H.OP2/1 2.77 LYS464:D.NZ/1
DA9:H.OP1/1 2.83 GLY173:B.N/1
DA9:H.OP1/1 2.99 ARG629:D.NH1/1
DA9:H.OP2/1 3.45 LYS464:D.NZ/1
DA9:H.OP2/1 3.13 ARG629:D.NH1/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DA13:E.OP2/1 2.97 103:E/1 3.04 GLN41:A.OE1/1
DT15:E.O3'/1 2.77 101:E/1 3.14 GLU433:C.OE1/1
DT7:F.O2/1 2.72 815:A/1 2.29 TYR20:A.OH/1
DC13:G.OP2/1 2.74 201:G/1 3.21 GLN41:B.OE1/1
DC13:G.OP2/1 2.74 201:G/1 2.91 ALA84:B.O/1
DA14:G.OP1/1 2.96 802:B/1 3.19 ARG28:B.O/1
DA14:G.OP1/1 2.96 802:B/1 2.86 VAL40:B.N/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text