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Nucleic atom dist Protein atom
DA1812:H.OP1/1 3.36 GLY1187:B.N/1
DA1812:H.OP1/1 2.79 THR1190:B.N/1
DA1812:H.OP1/1 2.41 THR1190:B.OG1/1
DA1812:H.OP2/1 3.37 ILE1189:B.N/1
DG1813:H.OP1/1 2.96 GLY1185:B.N/1
2DT1814:H.OP1/1 3.04 GLU1106:B.OE1/1
2DT1814:H.OP1/1 2.97 LYS1152:B.NZ/1
DC1907:J.OP1/1 3.03 ARG1247:B.NH1/1
DC1907:J.OP1/1 3.07 ILE1248:B.N/1
DT1908:J.OP2/1 2.69 GLY1246:B.N/1
DT1908:J.OP2/1 3.04 GLY1246:B.O/1
DT1908:J.OP2/1 2.72 ARG1336:B.NH2/1
DT1908:J.O5'/1 3.23 ARG1336:B.NH2/1
DA1909:J.OP1/1 2.62 LYS1243:B.N/1
DA1912:J.OP1/1 3.23 ALA1220:B.N/1
DA1912:J.OP2/1 3.26 ALA1220:B.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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