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Nucleic atom dist Protein atom
DA-54:I.OP1/1 3 SER53:D.N/1
DA-54:I.OP2/1 2.71 SER53:D.OG/1
DA-44:I.OP1/1 3.33 ARG30:D.NH1/1
DA-43:I.OP2/1 2.91 ARG32:C.NH1/1
DG-42:I.OP1/1 2.74 ARG17:C.N/1
DT-41:I.OP1/1 2.87 ARG20:C.NH2/1
DT-41:I.OP2/1 2.99 ARG20:C.NH2/1
DG-33:I.OP1/1 3.05 THR85:D.N/1
DG-33:I.OP1/1 2.4 THR85:D.OG1/1
DG-33:I.OP2/1 3.14 SER84:D.N/1
DG-33:I.OP2/1 3.11 SER84:D.OG/1
DC-23:I.OP2/1 3.08 SER86:A.N/1
DA-22:I.OP1/1 3.03 ARG72:A.NH1/1
DA-22:I.OP1/1 2.82 PHE84:A.N/1
DA-22:I.OP2/1 2.8 ARG72:A.NH2/1
DG-14:I.O3'/1 3.13 ARG63:A.NH1/1
DC-13:I.OP1/1 2.98 ARG36:B.NH2/1
DC-13:I.OP2/1 3.09 ARG36:B.NH1/1
DT-3:I.OP1/1 2.69 VAL117:A.N/1
DT-3:I.OP1/1 2.73 THR118:A.OG1/1
DG7:I.OP2/1 2.8 GLY48:F.N/1
DA8:I.OP1/1 2.76 ILE46:F.N/1
DA8:I.O3'/1 3.32 GLY44:E.N/1
DA9:I.OP1/1 2.85 GLY44:E.N/1
DA9:I.OP1/1 2.97 VAL46:E.N/1
DA9:I.OP1/1 3.17 ALA47:E.N/1
DA9:I.N3/1 3.14 ARG40:E.NH1/1
DA9:I.N3/1 3.15 ARG40:E.NH2/1
DC10:I.OP1/1 2.67 TYR41:E.N/1
DC10:I.O4'/1 3.14 ARG40:E.NH2/1
DT17:I.OP1/1 2.68 ARG69:E.NH2/1
DT18:I.OP1/1 2.9 LYS64:E.N/1
DT18:I.OP2/1 2.94 LEU65:E.N/1
DC27:I.OP1/1 2.7 LYS79:F.N/1
DC27:I.OP1/1 2.68 THR80:F.OG1/1
DT30:I.OP1/1 3.22 LYS28:D.N/1
DA37:I.OP1/1 2.78 ALA45:G.N/1
DA37:I.O4'/1 3.15 ARG42:G.NH1/1
DT38:I.OP1/1 2.51 ARG35:G.NH1/1
DT38:I.OP1/1 2.78 VAL43:G.N/1
DT38:I.OP2/1 2.41 ARG35:G.NH2/1
DG47:I.O3'/1 2.81 ARG29:G.NH2/1
DG48:I.OP1/1 3.18 ARG29:G.NH1/1
DG48:I.OP1/1 2.88 ARG29:G.NH2/1
DG48:I.OP1/1 3.08 SER33:H.N/1
DG48:I.OP1/1 3.05 SER33:H.O/1
DT49:I.OP1/1 3.11 LYS31:H.N/1
DC58:I.OP1/1 2.94 ARG77:G.N/1
DC58:I.OP2/1 3.09 THR76:G.N/1
DA59:I.OP1/1 2.67 LYS75:G.NZ/1
DG70:I.OP1/1 2.84 ARG42:A.N/1
DG70:I.OP1/1 2.87 THR45:A.OG1/1
DA-54:J.OP1/1 3.31 SER53:H.N/1
DG-42:J.OP1/1 3.17 ARG17:G.NE/1
DT-41:J.OP1/1 3.09 LYS15:G.N/1
DT-41:J.OP1/1 3.06 LYS15:G.O/1
DT-41:J.OP1/1 3.05 ARG20:G.NH2/1
DG-33:J.OP1/1 3.2 THR85:H.N/1
DG-33:J.OP1/1 2.68 THR85:H.OG1/1
DG-33:J.OP2/1 2.8 SER84:H.N/1
DG-33:J.OP2/1 3.06 SER84:H.OG/1
DC-23:J.OP2/1 3.18 SER86:E.N/1
DA-22:J.OP1/1 2.89 ARG72:E.NH1/1
DA-22:J.OP1/1 2.9 PHE84:E.N/1
DA-22:J.OP2/1 3.13 ARG72:E.NH2/1
DC-13:J.OP1/1 3.15 ARG36:F.NH2/1
DC-13:J.OP2/1 2.87 ARG36:F.NH1/1
DG-5:J.OP1/1 2.62 ARG42:E.NE/1
DG-5:J.OP1/1 2.97 ARG42:E.NH2/1
DT-3:J.OP1/1 2.74 VAL117:E.N/1
DT-3:J.OP1/1 2.77 THR118:E.OG1/1
DG7:J.OP2/1 2.6 GLY48:B.N/1
DA8:J.OP1/1 2.63 ILE46:B.N/1
DA8:J.OP2/1 2.54 ARG35:B.NH2/1
DA8:J.O3'/1 3.09 GLY44:A.N/1
DA9:J.OP1/1 2.79 GLY44:A.N/1
DA9:J.OP1/1 2.77 VAL46:A.N/1
DA9:J.OP1/1 3.3 ALA47:A.N/1
DA9:J.N3/1 2.69 ARG40:A.NH2/1
DC10:J.OP1/1 2.83 TYR41:A.N/1
DT17:J.OP1/1 3.33 ARG69:A.NH2/1
DT17:J.OP2/1 3.05 ARG69:A.NH1/1
DT18:J.OP1/1 3.09 LYS64:A.N/1
DT18:J.OP2/1 3.03 LEU65:A.N/1
DC27:J.OP1/1 2.73 LYS79:B.N/1
DC27:J.OP1/1 3.1 THR80:B.N/1
DC27:J.OP1/1 2.68 THR80:B.OG1/1
DG29:J.OP1/1 3.02 THR29:H.N/1
DG29:J.O3'/1 3.04 LYS28:H.NZ/1
DT30:J.OP1/1 2.69 LYS28:H.NZ/1
DA37:J.OP1/1 2.96 ALA45:C.N/1
DT38:J.OP1/1 3.05 ARG35:C.NH1/1
DT38:J.OP1/1 3.13 VAL43:C.N/1
DG47:J.O3'/1 2.92 ARG29:C.NH1/1
DG48:J.OP1/1 2.85 ARG29:C.NH1/1
DG48:J.OP1/1 2.82 ARG29:C.NH2/1
DG48:J.OP1/1 3.23 SER33:D.N/1
DT49:J.OP1/1 2.79 LYS31:D.N/1
DC58:J.OP1/1 2.88 THR76:C.N/1
DC58:J.OP1/1 2.69 ARG77:C.N/1
DC58:J.OP2/1 3.13 THR76:C.N/1
DG70:J.OP1/1 2.91 ARG42:E.N/1
DG70:J.OP1/1 2.56 THR45:E.OG1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT-65:I.OP1/1 3.15 139:E/1 2.92 ARG49:E.O/1
DA-32:I.OP1/1 2.67 79:I/1 2.67 ARG83:D.NE/1
DC-23:I.OP2/1 2.81 77:I/1 3 SER87:A.N/1
DA8:I.OP2/1 2.8 134:F/1 2.59 ILE46:F.O/1
DA8:I.OP2/1 2.8 134:F/1 2.38 TYR51:F.OH/1
DC-23:J.OP2/1 2.96 137:J/1 2.97 SER87:E.N/1
DC-13:J.OP1/1 2.86 113:F/1 2.52 THR30:F.OG1/1
DA-12:J.OP1/1 3.11 110:F/1 2.8 LYS31:F.N/1
DA-12:J.OP2/1 3.05 110:F/1 2.8 LYS31:F.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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