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Nucleic atom dist Protein atom
DG6:T.N7/1 2.53 LYS280:A.NZ/1
DG6:T.N3/1 3.25 ARG283:A.NH1/1
DC7:T.OP1/1 2.92 THR292:A.OG1/1
DC7:T.O2/1 3.19 ARG283:A.NH1/1
DC8:T.OP1/1 3.03 ASN294:A.ND2/1
DG9:T.OP1/1 2.66 TYR296:A.OH/1
DC10:T.OP1/1 2.92 THR233:A.N/1
DC10:T.OP1/1 2.87 LYS234:A.N/1
DA11:T.OP1/1 3.06 LYS230:A.N/1
DC8:P.OP1/1 3.05 GLY107:A.N/1
DC8:P.OP1/1 2.83 ALA110:A.N/1
DC8:P.OP2/1 2.97 SER109:A.N/1
DC8:P.OP2/1 2.97 SER109:A.N/1
DC8:P.OP2/1 3.05 SER109:A.OG/1
DG9:P.OP1/1 2.78 GLY105:A.N/1
DDG10:P.OP1/1 2.82 ARG254:A.NH2/1
DG1:D.OP2/1 3.33 LYS68:A.NZ/1
DT2:D.OP1/1 2.69 GLY66:A.N/1
DT2:D.OP1/1 3 ILE69:A.N/1
DT2:D.OP2/1 3.25 LYS68:A.N/1
DC3:D.OP1/1 2.72 GLY64:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC5:T.O2/1 3.16 639:A/1 3.03 HIS34:A.O/1
DG6:T.N7/1 2.98 546:A/1 2.41 LYS280:A.NZ/1
DC7:T.OP1/1 2.58 106:T/1 3.06 ARG283:A.O/1
DC7:T.OP1/1 2.58 106:T/1 3.05 ILE293:A.N/1
DC7:T.O2/1 2.89 474:A/1 2.82 ARG283:A.NH1/1
DC7:T.O2/1 2.89 474:A/1 2.48 GLU295:A.OE1/1
DC8:T.OP1/1 2.74 662:A/1 2.58 ARG299:A.NH2/1
DC8:T.O2/1 3.1 453:A/1 2.57 GLU295:A.OE2/1
DG9:T.N2/1 2.96 94:T/1 3 LYS234:A.NZ/1
DC10:T.OP2/1 2.72 68:T/1 2.79 GLU232:A.N/1
DA11:T.OP1/1 2.98 366:A/1 2.96 LYS230:A.O/1
DA11:T.OP2/1 2.64 137:T/1 2.95 LYS230:A.O/1
DA11:T.O3'/1 3.08 17:T/1 3.06 HIS135:A.N/1
DT12:T.OP1/1 2.62 43:T/1 2.87 HIS134:A.N/1
DT12:T.OP1/1 2.95 17:T/1 3.06 HIS135:A.N/1
DG7:P.OP1/1 2.93 469:A/1 3.2 GLN31:A.NE2/1
DG7:P.OP1/1 2.93 469:A/1 2.78 SER109:A.OG/1
DG9:P.OP2/1 2.72 130:P/1 3.16 THR101:A.O/1
DG9:P.N3/1 2.75 88:P/1 2.8 LYS234:A.NZ/1
DDG10:P.O4'/1 2.87 88:P/1 2.8 LYS234:A.NZ/1
DG1:D.OP1/1 2.9 463:A/1 2.85 TYR39:A.OH/1
DG1:D.OP1/1 2.9 463:A/1 2.79 LYS72:A.NZ/1
DG1:D.N2/1 3.05 639:A/1 3.03 HIS34:A.O/1
DC3:D.OP2/1 2.56 93:D/1 2.87 LYS60:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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