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Nucleic atom dist Protein atom
DT7:T.OP1/1 2.87 THR292:A.OG1/1
DC8:T.OP1/1 3.17 ASN294:A.ND2/1
DG9:T.OP1/1 2.68 TYR296:A.OH/1
DG9:T.N3/1 2.79 LYS234:A.NZ/1
DC10:T.OP1/1 3.03 THR233:A.N/1
DC10:T.OP1/1 2.98 LYS234:A.N/1
DA11:T.OP1/1 3.13 LYS230:A.N/1
DC8:P.OP1/1 3.14 GLY107:A.N/1
DC8:P.OP1/1 2.73 ALA110:A.N/1
DC8:P.OP2/1 2.85 SER109:A.N/1
DG9:P.OP1/1 2.85 GLY105:A.N/1
DA10:P.OP1/1 2.68 ARG254:A.NH2/1
DA10:P.O3'/1 3.14 ASP192:A.OD1/1
DA10:P.O3'/1 2.97 ASP256:A.OD2/1
DA10:P.N3/1 2.99 TYR271:A.OH/1
DG1:D.OP1/1 2.87 LYS68:A.NZ/1
DG1:D.OP2/1 3.06 LYS68:A.NZ/1
DT2:D.OP1/1 2.74 GLY66:A.N/1
DT2:D.OP1/1 3 ILE69:A.N/1
DT2:D.OP2/1 3.31 LYS68:A.N/1
DC3:D.OP1/1 2.8 GLY64:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT7:T.OP1/1 2.85 662:A/1 2.83 ARG283:A.O/1
DT7:T.OP1/1 2.85 662:A/1 2.85 ILE293:A.N/1
DC8:T.OP1/1 2.84 575:A/1 2.8 ARG299:A.NH2/1
DC8:T.O2/1 3.01 563:A/1 2.72 GLU295:A.OE2/1
DG9:T.N2/1 2.91 104:T/1 2.96 LYS234:A.NZ/1
DC10:T.OP2/1 2.73 106:T/1 2.74 GLU232:A.N/1
DT12:T.OP1/1 2.83 124:T/1 2.87 HIS134:A.N/1
DG7:P.OP1/1 2.66 104:P/1 3.23 GLN31:A.NE2/1
DG9:P.OP2/1 2.86 551:A/1 2.71 THR101:A.O/1
DG9:P.N2/1 3.07 109:P/1 3.13 LYS234:A.NZ/1
DG9:P.N3/1 2.74 507:A/1 2.57 LYS234:A.NZ/1
DA10:P.OP1/1 2.6 101:P/1 2.86 ASP190:A.OD2/1
DA10:P.O4'/1 2.76 507:A/1 2.57 LYS234:A.NZ/1
DG1:D.OP1/1 2.78 545:A/1 2.7 TYR39:A.OH/1
DG1:D.OP1/1 2.78 545:A/1 2.68 LYS72:A.NZ/1
DG1:D.OP1/1 2.84 553:A/1 2.82 LYS72:A.NZ/1
DG1:D.OP2/1 2.57 106:D/1 2.74 LYS35:A.NZ/1
DC3:D.OP2/1 2.84 101:D/1 2.87 LYS60:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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