Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DC1:E.N3/1 3.38 LYS251:A.NZ/1
DC1:E.N4/1 3.11 GLU219:A.OE1/1
DC1:E.N4/1 2.77 GLU219:A.OE2/1
DC3:E.OP1/1 2.44 SER360:A.OG/1
DC3:E.OP1/1 3.09 ILE362:A.N/1
DG5:E.N2/1 3.31 LYS706:A.NZ/1
DA6:E.OP1/1 3.26 GLY393:A.N/1
DA6:E.N3/1 3.41 LYS706:A.NZ/1
DA7:E.OP1/1 2.64 LYS705:A.NZ/1
DA7:E.O5'/1 3.34 LYS705:A.NZ/1
DC11:E.OP1/1 2.53 LYS874:A.NZ/1
DG13:E.OP1/1 3.41 LYS800:A.N/1
DA110:F.OP1/1 3.07 SER784:A.O/1
DT111:F.OP1/1 3.14 SER784:A.N/1
DT111:F.OP2/1 2.57 SER784:A.OG/1
DT112:F.OP1/1 3.02 SER735:A.N/1
DT112:F.OP1/1 2.33 SER735:A.OG/1
DT112:F.OP2/1 2.49 ASN284:A.OD1/1
DA114:F.OP1/1 2.52 TYR708:A.OH/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DG2:E.N2/1 3.18 1013:A/1 2.77 GLU219:A.OE1/1
DG2:E.N2/1 3.18 1013:A/1 2.85 ASP275:A.OD1/1
DA7:E.OP1/1 2.81 983:A/1 2.73 VAL396:A.N/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

text