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Nucleic atom dist Protein atom
DC1:G.N4/1 2.99 GLU219:B.OE2/1
DC3:G.OP1/1 2.67 SER360:B.OG/1
DA6:G.N3/1 3.08 LYS706:B.NZ/1
DA7:G.OP1/1 3.05 LYS705:B.NZ/1
DA7:G.O4'/1 3.19 LYS706:B.NZ/1
DG9:G.OP1/1 3.08 ARG707:B.NH1/1
DA12:G.OP1/1 2.69 LYS844:B.NZ/1
DG13:G.OP1/1 3.19 LYS800:B.N/1
DC109:H.OP1/1 3.35 LYS790:B.NZ/1
DC109:H.OP1/1 2.7 TYR791:B.OH/1
DA110:H.OP1/1 2.75 SER784:B.O/1
DA110:H.OP1/1 3.08 ASN786:B.N/1
DA110:H.OP1/1 2.74 HIS804:B.NE2/1
DA110:H.OP2/1 3.01 ASN786:B.ND2/1
DT111:H.OP1/1 3.03 SER784:B.N/1
DT111:H.OP2/1 2.59 SER784:B.OG/1
DT112:H.OP1/1 2.69 SER735:B.N/1
DT112:H.OP1/1 2.61 SER735:B.OG/1
DC113:H.OP1/1 3.01 GLY729:B.N/1
DA114:H.OP1/1 2.44 TYR708:B.OH/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC3:G.OP2/1 3.03 366:G/1 3.1 SER360:B.OG/1
DG5:G.OP1/1 2.69 26:G/1 3.4 TYR391:B.N/1
DG5:G.N3/1 3.13 1014:B/1 2.65 ALA394:B.N/1
DT8:G.OP1/1 2.84 931:B/1 2.76 GLU398:B.OE1/1
DT8:G.OP1/1 2.84 931:B/1 2.82 LYS705:B.N/1
DG9:G.OP1/1 2.59 271:G/1 2.76 THR703:B.OG1/1
DA12:G.OP1/1 2.86 1019:B/1 2.77 CYS801:B.O/1
DA12:G.OP1/1 2.86 1019:B/1 2.64 ARG806:B.NE/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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