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Nucleic atom dist Protein atom
DC1:I.N4/1 3.4 GLU219:C.OE1/1
DC3:I.OP1/1 2.8 SER360:C.OG/1
DC3:I.OP1/1 3.11 ILE362:C.N/1
DA6:I.OP1/1 3.14 GLY393:C.N/1
DA7:I.OP1/1 2.8 LYS705:C.NZ/1
DG9:I.OP1/1 3.14 ARG707:C.NH2/1
DA10:I.OP2/1 2.96 LYS878:C.NZ/1
DC11:I.OP1/1 2.7 LYS874:C.NZ/1
DA12:I.OP1/1 2.79 LYS844:C.NZ/1
DG13:I.OP1/1 2.77 LYS800:C.N/1
DC109:J.OP1/1 3.07 LYS790:C.NZ/1
DC109:J.OP1/1 2.46 TYR791:C.OH/1
DA110:J.OP1/1 2.88 HIS804:C.NE2/1
DA110:J.OP2/1 3.15 ASN786:C.ND2/1
DT111:J.OP2/1 2.75 SER784:C.OG/1
DT112:J.OP1/1 2.57 SER735:C.N/1
DC113:J.OP1/1 3.09 GLY729:C.N/1
DC113:J.O2/1 2.96 LYS706:C.NZ/1
DA114:J.OP1/1 2.75 TYR708:C.OH/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG5:I.O4'/1 3.05 1067:C/1 2.59 TYR567:C.OH/1
DG5:I.N2/1 2.86 144:I/1 2.91 LYS706:C.NZ/1
DA7:I.OP1/1 2.63 99:I/1 2.64 VAL396:C.N/1
DT8:I.OP1/1 2.75 42:I/1 2.9 GLU398:C.OE2/1
DT8:I.OP1/1 2.75 42:I/1 2.78 LYS705:C.N/1
DA12:I.OP1/1 2.69 200:I/1 2.86 CYS801:C.O/1
DA12:I.OP1/1 2.69 200:I/1 3.02 ARG806:C.NE/1
DT111:J.OP1/1 2.34 121:J/1 2.71 SER735:C.OG/1
DT111:J.OP1/1 2.34 121:J/1 2.87 LYS829:C.NZ/1
DT112:J.OP1/1 2.77 84:J/1 2.79 GLN733:C.O/1
DC113:J.O3'/1 2.97 971:C/1 2.58 TYR619:C.OH/1
DC113:J.O3'/1 2.97 971:C/1 2.69 ASP621:C.OD1/1
DA114:J.OP1/1 2.59 971:C/1 2.58 TYR619:C.OH/1
DA114:J.OP1/1 2.59 971:C/1 2.69 ASP621:C.OD1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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