Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DG2:I.OP2/1 2.64 SER360:C.OG/1
DG2:I.OP2/1 2.78 ILE362:C.N/1
DG2:I.O6/1 2.91 LYS279:C.NZ/1
DG5:I.OP1/1 2.95 GLY393:C.N/1
DA6:I.OP1/1 2.86 LYS705:C.NZ/1
DC11:I.OP1/1 2.75 LYS844:C.NZ/1
DA12:I.OP1/1 2.78 LYS800:C.N/1
DA110:J.OP1/1 2.95 LYS790:C.NZ/1
DA110:J.OP1/1 2.77 TYR791:C.OH/1
DT111:J.OP1/1 2.7 SER784:C.O/1
DT111:J.OP1/1 3.07 ASN786:C.N/1
DT111:J.OP1/1 2.95 HIS804:C.NE2/1
DT111:J.OP2/1 3.46 ASN786:C.ND2/1
DT112:J.OP2/1 3.09 SER784:C.OG/1
DC113:J.OP1/1 2.72 SER735:C.N/1
DC113:J.OP1/1 2.84 SER735:C.OG/1
DC113:J.OP2/1 3.33 ASN284:C.ND2/1
DA114:J.OP1/1 3.33 GLY729:C.N/1
DA115:J.OP1/1 3.18 ASP621:C.OD1/1
DA115:J.OP2/1 2.81 TYR708:C.OH/1
DA115:J.O3'/1 2.2 ASP623:C.OD2/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

text