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Nucleic atom dist Protein atom
DA6:K.OP1/1 2.76 ARG311:B.NE/1
DA6:K.OP2/1 3.03 LYS335:B.NZ/1
DA8:K.OP2/1 3.01 LYS163:B.NZ/1
DA10:K.O3'/1 2.73 ARG311:A.NH1/1
DG11:K.OP1/1 2.7 ARG311:A.NH1/1
DG11:K.O3'/1 3.2 LYS162:A.NZ/1
DA12:K.OP1/1 3.14 LYS163:A.N/1
DG13:K.OP1/1 2.72 LYS198:A.NZ/1
DT14:L.OP1/1 2.79 THR249:A.N/1
DG19:L.OP1/1 2.84 THR249:B.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG9:K.O3'/1 2.99 62:K/1 3.11 LYS309:A.NZ/1
DT13:L.OP1/1 2.98 14:A/1 2.84 ILE243:A.O/1

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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