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Nucleic atom dist Protein atom
DT4:B.OP1/1 3.08 THR155:A.OG1/1
DT4:B.OP1/1 2.89 LYS156:A.N/1
DG11:B.OP1/1 2.72 TRP30:A.NE1/1
DG11:B.OP1/1 2.85 ASN32:A.ND2/1
DG12:B.OP1/1 2.69 LYS113:A.NZ/1
DA9:C.OP2/1 3.21 ASN174:A.N/1
DA9:C.OP2/1 2.78 ARG264:A.NH1/1
DA9:C.N3/1 2.64 ARG76:A.NH1/1
DG10:C.OP1/1 2.87 HIS74:A.NE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA9:C.OP1/1 3.03 194:C/1 3.1 TYR242:A.OH/1
DA9:C.OP2/1 2.62 81:C/1 3.29 ARG264:A.NH2/1
DG10:C.OP1/1 2.68 50:C/1 2.82 LYS60:A.N/1
DG10:C.OP2/1 2.94 368:A/1 2.66 GLY171:A.N/1
DG10:C.N3/1 2.71 36:C/1 2.98 ARG76:A.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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