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Nucleic atom dist Protein atom
DG10:B.OP1/1 2.86 TRP30:A.NE1/1
DG10:B.OP1/1 2.7 ASN32:A.ND2/1
DG11:B.OP1/1 2.78 LYS113:A.NZ/1
DG8:C.O3'/1 3.41 HIS74:A.NE2/1
DG8:C.N3/1 2.72 ARG76:A.NH2/1
DG9:C.OP1/1 2.98 HIS74:A.NE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG10:B.N3/1 2.7 119:B/1 2.77 ALA112:A.O/1
DT7:C.O2/1 2.92 95:C/1 3.06 ARG76:A.NE/1
DG8:C.O4'/1 2.83 95:C/1 3.06 ARG76:A.NE/1
DG8:C.O4'/1 2.83 95:C/1 3.05 ARG76:A.NH2/1
DG9:C.OP1/1 2.81 315:A/1 2.74 LYS60:A.N/1
DG9:C.OP2/1 2.71 69:C/1 2.97 LYS60:A.NZ/1
DG9:C.OP2/1 2.84 333:A/1 2.6 GLY171:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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