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Nucleic atom dist Protein atom
DT1:T.N3/1 2.68 ASN786:A.OD1/1
DT1:T.O4/1 3.17 ASN786:A.ND2/1
DC2:T.OP1/1 3.1 ARG260:A.NH2/1
DC2:T.OP2/1 3.05 ARG260:A.NE/1
DC2:T.N4/1 2.77 GLU219:A.OE2/1
DA4:T.OP1/1 2.52 SER360:A.OG/1
DA4:T.OP1/1 3.09 ILE362:A.N/1
DA4:T.O3'/1 3.25 ASN572:A.ND2/1
DG5:T.OP1/1 3.07 ASN572:A.ND2/1
DA7:T.OP1/1 3.06 GLY393:A.N/1
DA8:T.OP1/1 2.75 LYS705:A.NZ/1
DT13:T.OP1/1 2.62 LYS844:A.NZ/1
DC14:T.OP1/1 2.78 LYS800:A.N/1
DG110:P.OP1/1 2.65 TYR791:A.OH/1
DC111:P.OP1/1 3.08 ASN786:A.N/1
DC111:P.OP1/1 2.89 HIS804:A.NE2/1
DC111:P.OP2/1 2.75 ASN786:A.ND2/1
DT112:P.OP1/1 2.94 SER784:A.N/1
DT112:P.OP2/1 2.94 SER784:A.OG/1
DT113:P.OP1/1 2.71 SER735:A.N/1
DT113:P.OP1/1 2.95 SER735:A.OG/1
DT113:P.OP2/1 2.57 ASN284:A.ND2/1
DA114:P.OP1/1 2.75 GLY729:A.N/1
DA114:P.N3/1 3.01 LYS706:A.NZ/1
DC115:P.OP1/1 2.53 TYR708:A.OH/1
DC115:P.O3'/1 3.04 ASP623:A.OD2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG3:T.O6/1 2.81 489:T/1 2.86 ASP275:A.OD1/1
DT6:T.OP1/1 2.76 1319:A/1 2.71 GLN389:A.O/1
DT6:T.OP1/1 2.55 245:T/1 3.2 TYR391:A.N/1
DT6:T.O2/1 2.74 19:T/1 3.08 ALA394:A.N/1
DA7:T.O4'/1 2.78 20:T/1 3 LYS706:A.NZ/1
DA8:T.OP1/1 2.69 21:T/1 2.74 VAL396:A.N/1
DG9:T.OP1/1 2.71 1242:A/1 2.48 GLU398:A.OE1/1
DG9:T.OP1/1 2.72 22:T/1 2.82 GLU398:A.OE2/1
DG9:T.OP1/1 2.72 22:T/1 2.99 LYS705:A.N/1
DG9:T.N3/1 2.85 1017:A/1 2.69 LYS734:A.NZ/1
DC10:T.OP1/1 3.01 1277:A/1 2.87 THR703:A.O/1
DC10:T.OP1/1 3.01 1277:A/1 2.6 THR703:A.OG1/1
DC10:T.O4'/1 2.78 1017:A/1 2.69 LYS734:A.NZ/1
DA11:T.OP1/1 2.72 1131:A/1 2.59 LYS874:A.O/1
DT13:T.OP1/1 2.82 1093:A/1 2.74 CYS801:A.O/1
DT13:T.OP1/1 2.82 1093:A/1 2.76 ARG806:A.NE/1
DG110:P.OP1/1 2.67 420:P/1 2.72 ASN787:A.ND2/1
DA114:P.OP1/1 2.53 298:P/1 3.14 GLN733:A.NE2/1
DA114:P.O3'/1 3.02 13:P/1 2.64 TYR619:A.OH/1
DA114:P.O3'/1 3.02 13:P/1 2.69 ASP621:A.OD2/1
DC115:P.OP1/1 2.62 13:P/1 2.64 TYR619:A.OH/1
DC115:P.OP1/1 2.62 13:P/1 2.69 ASP621:A.OD2/1
DC115:P.OP1/1 2.83 1033:A/1 2.78 SER624:A.OG/1
DC115:P.OP1/1 2.83 1033:A/1 2.88 TYR626:A.OH/1
DC115:P.O3'/1 2.65 493:P/1 2.76 ASP411:A.OD2/1
DC115:P.O2/1 2.71 19:P/1 2.85 THR622:A.OG1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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