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Nucleic atom dist Protein atom
DA4:T.OP2/1 2.66 SER360:A.OG/1
DA4:T.OP2/1 3.3 ILE362:A.N/1
DA4:T.O3'/1 3.06 ASN572:A.ND2/1
DG5:T.OP1/1 3.01 ASN572:A.ND2/1
DT6:T.O3'/1 2.67 GLY393:A.N/1
DA7:T.OP1/1 2.89 GLY393:A.N/1
DA8:T.OP1/1 2.73 LYS705:A.NZ/1
DT13:T.OP1/1 2.68 LYS844:A.NZ/1
DC14:T.OP1/1 2.99 LYS800:A.N/1
DG110:P.OP1/1 2.96 TYR791:A.OH/1
DC111:P.OP1/1 3.15 HIS804:A.NE2/1
DC111:P.OP2/1 3.32 ASN786:A.ND2/1
DT112:P.OP1/1 3.25 SER784:A.N/1
DT112:P.OP2/1 2.93 SER784:A.OG/1
DT113:P.OP1/1 2.89 SER735:A.N/1
DT113:P.OP2/1 2.87 ASN284:A.ND2/1
DA114:P.OP1/1 2.87 GLY729:A.N/1
DA114:P.N3/1 2.91 LYS706:A.NZ/1
DC115:P.OP1/1 2.68 TYR708:A.OH/1
DC115:P.O3'/1 3.18 ASP623:A.OD2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT6:T.OP1/1 2.54 133:T/1 3.23 TYR391:A.N/1
DT6:T.O2/1 2.96 959:A/1 2.9 ALA394:A.N/1
DA7:T.O4'/1 2.64 19:T/1 2.87 LYS706:A.NZ/1
DA8:T.OP1/1 2.72 51:T/1 2.78 VAL396:A.N/1
DG9:T.OP1/1 2.62 56:T/1 3.01 GLU398:A.OE2/1
DG9:T.OP1/1 2.62 56:T/1 2.8 LYS705:A.N/1
DA11:T.OP1/1 2.63 1061:A/1 2.6 LYS874:A.O/1
DT13:T.OP1/1 2.77 1070:A/1 2.75 CYS801:A.O/1
DT13:T.OP1/1 2.77 1070:A/1 2.77 ARG806:A.NE/1
DA114:P.OP1/1 2.44 195:P/1 2.85 GLN733:A.NE2/1
DA114:P.O3'/1 2.86 16:P/1 2.79 TYR619:A.OH/1
DA114:P.O3'/1 2.86 16:P/1 2.91 ASP621:A.OD2/1
DC115:P.OP1/1 2.57 16:P/1 2.79 TYR619:A.OH/1
DC115:P.OP1/1 2.57 16:P/1 2.91 ASP621:A.OD2/1
DC115:P.OP1/1 2.79 1029:A/1 2.71 SER624:A.OG/1
DC115:P.OP1/1 2.79 1029:A/1 2.69 TYR626:A.OH/1
DC115:P.O2/1 2.87 1105:A/1 2.8 THR622:A.OG1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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