Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DT1:T.N3/1 2.8 ASN786:A.ND2/1
DT1:T.O4/1 3.05 ASN786:A.OD1/1
DC2:T.OP1/1 2.87 ARG260:A.NH2/1
DC2:T.OP2/1 3.4 ASN255:A.ND2/1
DC2:T.OP2/1 3.12 ARG260:A.NE/1
DC2:T.N4/1 2.88 GLU219:A.OE2/1
DA4:T.OP1/1 2.52 SER360:A.OG/1
DA4:T.OP1/1 3.12 ILE362:A.N/1
DA4:T.O3'/1 3.04 ASN572:A.ND2/1
DG5:T.OP1/1 3.02 ASN572:A.ND2/1
DA7:T.OP1/1 2.94 GLY393:A.N/1
DA8:T.OP1/1 2.77 LYS705:A.NZ/1
DG12:T.OP1/1 2.72 LYS874:A.NZ/1
DT13:T.OP1/1 2.8 LYS844:A.NZ/1
DC14:T.OP1/1 2.84 LYS800:A.N/1
DG110:P.OP1/1 2.88 LYS790:A.NZ/1
DG110:P.OP1/1 2.64 TYR791:A.OH/1
DC111:P.OP1/1 3.25 SER784:A.O/1
DC111:P.OP1/1 3.14 ASN786:A.N/1
DC111:P.OP1/1 2.82 HIS804:A.NE2/1
DC111:P.OP2/1 2.86 ASN786:A.OD1/1
DT112:P.OP1/1 3.02 SER784:A.N/1
DT112:P.OP2/1 2.75 SER784:A.OG/1
DT113:P.OP1/1 2.8 SER735:A.N/1
DT113:P.OP1/1 2.92 SER735:A.OG/1
DT113:P.OP2/1 2.59 ASN284:A.ND2/1
DA114:P.OP1/1 2.82 GLY729:A.N/1
DA114:P.N3/1 2.95 LYS706:A.NZ/1
DOC115:P.OP1/1 2.67 TYR708:A.OH/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DC2:T.N4/1 2.98 657:T/1 3.16 LYS251:A.NZ/1
DG3:T.O6/1 2.67 322:T/1 2.84 ARG260:A.NH2/1
DG3:T.O6/1 2.78 1123:A/1 2.7 ASP275:A.OD1/1
DG3:T.N2/1 2.88 1393:A/1 2.77 GLN356:A.O/1
DA4:T.N7/1 3.13 1446:A/1 3.01 LYS279:A.NZ/1
DG5:T.N3/1 2.85 928:A/1 2.52 TYR567:A.OH/1
DT6:T.OP1/1 2.61 173:T/1 2.83 GLN389:A.O/1
DT6:T.OP1/1 2.67 33:T/1 3.29 TYR391:A.N/1
DT6:T.O4'/1 2.67 928:A/1 2.52 TYR567:A.OH/1
DT6:T.O2/1 2.75 20:T/1 3.1 ALA394:A.N/1
DA7:T.O4'/1 2.74 19:T/1 2.87 LYS706:A.NZ/1
DA8:T.OP1/1 2.63 54:T/1 3.03 VAL396:A.N/1
DG9:T.OP1/1 2.71 1386:A/1 2.61 GLU398:A.OE1/1
DG9:T.OP1/1 2.65 48:T/1 2.7 GLU398:A.OE2/1
DG9:T.OP1/1 2.65 48:T/1 2.94 LYS705:A.N/1
DC10:T.OP1/1 2.73 80:T/1 3.15 THR703:A.O/1
DC10:T.OP1/1 2.73 80:T/1 2.76 THR703:A.OG1/1
DA11:T.OP1/1 2.6 1111:A/1 2.6 LYS874:A.O/1
DT13:T.OP1/1 2.78 935:A/1 2.89 CYS801:A.O/1
DT13:T.OP1/1 2.78 935:A/1 2.69 ARG806:A.NE/1
DC14:T.OP1/1 2.72 446:T/1 2.82 GLY798:A.O/1
DG110:P.OP1/1 2.69 1242:A/1 2.66 ASN787:A.OD1/1
DC111:P.OP2/1 2.67 689:P/1 3.05 TYR257:A.OH/1
DT112:P.OP1/1 2.64 1103:A/1 2.56 SER735:A.OG/1
DT112:P.OP1/1 2.64 1103:A/1 2.78 LYS829:A.NZ/1
DT112:P.OP2/1 2.9 1312:A/1 2.76 ASN284:A.ND2/1
DT112:P.O2/1 2.82 635:P/1 2.83 LYS734:A.NZ/1
DA114:P.OP1/1 2.66 56:P/1 2.89 GLN733:A.NE2/1
DA114:P.O3'/1 3.04 923:A/1 2.57 TYR619:A.OH/1
DA114:P.O3'/1 3.04 923:A/1 2.66 ASP621:A.OD2/1
DOC115:P.OP1/1 2.77 923:A/1 2.57 TYR619:A.OH/1
DOC115:P.OP1/1 2.77 923:A/1 2.66 ASP621:A.OD2/1
DOC115:P.OP1/1 2.73 1197:A/1 2.67 SER624:A.OG/1
DOC115:P.OP1/1 2.73 1197:A/1 2.79 TYR626:A.OH/1
DOC115:P.OP2/1 2.69 300:P/1 2.86 LYS726:A.NZ/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

text